RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SERTM2A0A1B0GWG4 89 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 A6NNC1 897 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 RBFOX2O43251 390 aaKnown RBP eCLIP5.66□□□□□ -1.52e-9■■■■□ 21
RTN4-203ENST00000357376 SLC25A17O43808 307 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 MOSP00540 346 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 KIR2DL2P43627 348 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 ERVK11-1P61568 191 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 PRB3Q04118 309 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 PEAR1Q5VY43 1037 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 LHFPL4Q7Z7J7 247 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 MDS2Q8NDY4 140 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 OR9G1Q8NH87 305 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 ELOVL5Q9NYP7 299 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 AMMECR1Q9Y4X0 333 aaPredicted RBP5.66□□□□□ -1.5
RTN4-203ENST00000357376 AKAP6Q13023 2319 aa5.66□□□□□ -1.5
RTN4-203ENST00000357376 ABCA4P78363 2273 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 CHD3Q12873 2000 aaKnown RBP5.65□□□□□ -1.5
RTN4-203ENST00000357376 C15orf61A6NNL5 157 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 GFRA3O60609 400 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 HINT1P49773 126 aaPredicted RBP5.65□□□□□ -1.5
RTN4-203ENST00000357376 FAM27E3Q08E93 113 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 ZNF295-AS1Q8N0V1 137 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 OR10W1Q8NGF6 305 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 ZNRD1Q9P1U0 126 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 GOLT1BQ9Y3E0 138 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 PCNX2A6NKB5 2137 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 KBTBD11-OT1A0A1B0GTJ5 212 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 A0A1W2PRD5 423 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 A0A1W2PRF3 423 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 A0A1W2PRM7 423 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 A8MWP6 167 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 M0QZK8 103 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 TCF21O43680 179 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 YPEL1O60688 119 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 IGLV2-14P01704 120 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 MT-ND6P03923 174 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 MAS1LP35410 378 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 MLANAQ16655 118 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 Q6ZR03 302 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 WDR31Q8NA23 367 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 OR2T6Q8NHC8 308 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 YPEL2Q96QA6 119 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 DNAJC4Q9NNZ3 241 aa5.65□□□□□ -1.5
RTN4-203ENST00000357376 CPAMD8Q8IZJ3 1885 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 IGKV1D-17A0A075B6S4 117 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 PGPA6NDG6 321 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 AHRRA9YTQ3 701 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 HLA-DQA1P01909 254 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 CD59P13987 128 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 CCL3L1P16619 93 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 TMEM11P17152 192 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 GPR6P46095 362 aaPredicted RBP5.65□□□□□ -1.51
RTN4-203ENST00000357376 FOXA3P55318 350 aaPredicted RBP5.65□□□□□ -1.51
RTN4-203ENST00000357376 ACSF3Q4G176 576 aaPredicted RBP5.65□□□□□ -1.51
RTN4-203ENST00000357376 C11orf42Q8N5U0 333 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 VSTM2AQ8TAG5 236 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 ZNF714Q96N38 554 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 CHRDL1Q9BU40 450 aa5.65□□□□□ -1.51
RTN4-203ENST00000357376 ZNF71Q9NQZ8 489 aaPredicted RBP5.65□□□□□ -1.51
RTN4-203ENST00000357376 TRAV5A0A0B4J249 113 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 A0A1W2PN81 502 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 P01737 135 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 FTH1P19P0C7X4 201 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 PYYP10082 97 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 CD99P14209 185 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 TFPI2P48307 235 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 RELBQ01201 579 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 KRTCAP3Q53RY4 240 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 ASPHD1Q5U4P2 390 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 MRPL37Q9BZE1 423 aaKnown RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 ASCL3Q9NQ33 180 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 YLPM1P49750 1951 aaKnown RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 SRRM5B3KS81 715 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 AMY1AP04745 511 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 SAA1P0DJI8 122 aaPredicted RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 COL8A1P27658 744 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 HTR1DP28221 377 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 TCTAP57738 103 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 DAZAP2Q15038 168 aaPredicted RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 C10orf55Q5SWW7 151 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 OR4B1Q8NGF8 309 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 MRPL20Q9BYC9 149 aaKnown RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 PARD6GQ9BYG4 376 aaPredicted RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 NGBQ9NPG2 151 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 ZFHX2Q9C0A1 2572 aaPredicted RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 ZNF891A8MT65 544 aaPredicted RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 DLL1O00548 723 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 CT45A10P0DMU9 189 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 HIST1H1EP10412 219 aaKnown RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 GLRXP35754 106 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 FOXL1Q12952 345 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 SSBP4Q9BWG4 385 aaPredicted RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 CFAP54Q96N23 3096 aa5.64□□□□□ -1.51
RTN4-203ENST00000357376 INTS1Q8N201 2190 aaKnown RBP5.64□□□□□ -1.51
RTN4-203ENST00000357376 ZNF883P0CG24 379 aa5.63□□□□□ -1.51
RTN4-203ENST00000357376 NPPCP23582 126 aa5.63□□□□□ -1.51
RTN4-203ENST00000357376 COX19Q49B96 90 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms