RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 A0A1B0GX78 115 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 IGHV3-7P01780 117 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 GAGE5Q13069 117 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 GAGE6Q13070 117 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 WFDC2Q14508 124 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 SIGLEC8Q9NYZ4 499 aa13.01□□□□□ -0.33
RTN3-205ENST00000356000 REV3LO60673 3130 aa13□□□□□ -0.33
RTN3-205ENST00000356000 FBLL1A6NHQ2 334 aaKnown RBP13□□□□□ -0.33
RTN3-205ENST00000356000 CCL2P13500 99 aa13□□□□□ -0.33
RTN3-205ENST00000356000 FCGR2BP31994 310 aaPredicted RBP13□□□□□ -0.33
RTN3-205ENST00000356000 RHBDD2Q6NTF9 364 aa13□□□□□ -0.33
RTN3-205ENST00000356000 C8orf86Q6ZUL3 223 aa13□□□□□ -0.33
RTN3-205ENST00000356000 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
RTN3-205ENST00000356000 FAM168AQ92567 244 aa13□□□□□ -0.33
RTN3-205ENST00000356000 SIVA1O15304 175 aa13□□□□□ -0.33
RTN3-205ENST00000356000 P0C879 139 aa13□□□□□ -0.33
RTN3-205ENST00000356000 CXCL12P48061 93 aa13□□□□□ -0.33
RTN3-205ENST00000356000 SPATA46Q5T0L3 261 aa13□□□□□ -0.33
RTN3-205ENST00000356000 TMEM164Q5U3C3 297 aa13□□□□□ -0.33
RTN3-205ENST00000356000 TEPPQ6URK8 271 aa13□□□□□ -0.33
RTN3-205ENST00000356000 ACP7Q6ZNF0 438 aa13□□□□□ -0.33
RTN3-205ENST00000356000 OR9G4Q8NGQ1 327 aa13□□□□□ -0.33
RTN3-205ENST00000356000 SPTSSAQ969W0 71 aa13□□□□□ -0.33
RTN3-205ENST00000356000 HRASLS2Q9NWW9 162 aa13□□□□□ -0.33
RTN3-205ENST00000356000 TNFRSF18Q9Y5U5 241 aa13□□□□□ -0.33
RTN3-205ENST00000356000 USP34Q70CQ2 3546 aa13□□□□□ -0.33
RTN3-205ENST00000356000 KBTBD11-OT1A0A1B0GTJ5 212 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 TLX3O43711 291 aaPredicted RBP12.99□□□□□ -0.33
RTN3-205ENST00000356000 KLF7O75840 302 aaPredicted RBP12.99□□□□□ -0.33
RTN3-205ENST00000356000 PPP1CAP62136 330 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 TTC9CQ8N5M4 171 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 OR4X2Q8NGF9 303 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 ABHD17AQ96GS6 310 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 TRIB1Q96RU8 372 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.99□□□□□ -0.33
RTN3-205ENST00000356000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.99□□□□□ -0.33
RTN3-205ENST00000356000 PRSS12P56730 875 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
RTN3-205ENST00000356000 EYSQ5T1H1 3165 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 A1L4Q6 167 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 CLEC3BP05452 202 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 H0Y8G0 127 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 FAM87AP0C7U9 286 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 ARL4DP49703 201 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 GUSBP1Q15486 140 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 MIC13Q5XKP0 118 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 SFTPA2Q8IWL1 248 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 NHLRC2Q8NBF2 726 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
RTN3-205ENST00000356000 CYSLTR1Q9Y271 337 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 NOTCH4Q99466 2003 aa12.98□□□□□ -0.33
RTN3-205ENST00000356000 C15orf62A8K5M9 175 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 EFNA2O43921 213 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 SMIM13P0DJ93 91 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 CCL7P80098 99 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
RTN3-205ENST00000356000 C20orf204Q6ZNR8 217 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 MOB1BQ7L9L4 216 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 OOSP2Q86WS3 158 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
RTN3-205ENST00000356000 GGTLC1Q9BX51 225 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 TRBV6-6A0A0A6YYG2 114 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 NPIPB11E5RHQ5 1161 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 SPINK8P0C7L1 97 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 SH2D6Q7Z4S9 175 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 GTSF1Q8WW33 167 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 IGF2BP2-AS1Q96M15 143 aa12.97□□□□□ -0.33
RTN3-205ENST00000356000 HSPB6O14558 160 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 FOXH1O75593 365 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 ETDBQ3ZM63 59 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 TREML4Q6UXN2 200 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 NABP1Q96AH0 204 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 MGST2Q99735 147 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 C1QTNF5Q9BXJ0 243 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 OR1A1Q9P1Q5 309 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 LINC00312Q9Y6C7 94 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 A0A1W2PRD5 423 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 A0A1W2PRF3 423 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 A0A1W2PRM7 423 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 WISP2O76076 250 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 CRYGSP22914 178 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 FASLGP48023 281 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 RPS21P63220 83 aaKnown RBP12.96□□□□□ -0.33
RTN3-205ENST00000356000 NANOS1Q8WY41 292 aaKnown RBP12.96□□□□□ -0.33
RTN3-205ENST00000356000 ADTRPQ96IZ2 230 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 OXGR1Q96P68 337 aa12.96□□□□□ -0.33
RTN3-205ENST00000356000 RPP25Q9BUL9 199 aaKnown RBP12.96□□□□□ -0.33
RTN3-205ENST00000356000 A0A1B0GXF2 115 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 SMAD7O15105 426 aaKnown RBP12.95□□□□□ -0.34
RTN3-205ENST00000356000 BCL3P20749 454 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 CST6Q15828 149 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 ATP5L2Q7Z4Y8 100 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms