RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 PLSCR2Q9NRY7 297 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 SPACA3Q8IXA5 215 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 NBR2O15453 112 aa11.08□□□□□ -0.64
SCN8A-202ENST00000355133 ZNF318Q5VUA4 2279 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 IGLV3-12A0A075B6K2 115 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 TRGV2A0A075B6R0 118 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 FAM71F2Q6NXP2 309 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
SCN8A-202ENST00000355133 AHCTF1Q8WYP5 2266 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 CEP290O15078 2479 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 MDC1Q14676 2089 aaKnown RBP11.07□□□□□ -0.64
SCN8A-202ENST00000355133 TBR1Q16650 682 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 C21orf62-AS1Q17RA5 79 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 Q9H3A6 140 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 PTPRFP10586 1907 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 TBX6O95947 436 aaPredicted RBP11.07□□□□□ -0.64
SCN8A-202ENST00000355133 THBDP07204 575 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 TMEM136Q6ZRR5 245 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
SCN8A-202ENST00000355133 CSRP1P21291 193 aaKnown RBP11.06□□□□□ -0.64
SCN8A-202ENST00000355133 C11orf44Q8N8P7 122 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 LYZL4Q96KX0 146 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 IMMP2LQ96T52 175 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 LOC102723996A0A087X1L8 192 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 K7ERU9 68 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 APOHP02749 345 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-202ENST00000355133 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-202ENST00000355133 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 IFITM2Q01629 132 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 TOMM7Q9P0U1 55 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 SPTBP11277 2137 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
SCN8A-202ENST00000355133 FMC1Q96HJ9 113 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-202ENST00000355133 TUBGCP6Q96RT7 1819 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 A0A087WV48 116 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 OR11H1Q8NG94 326 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 OR11H2Q8NH07 326 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 NPFFR1Q9GZQ6 430 aa11.06□□□□□ -0.64
SCN8A-202ENST00000355133 LEMD1Q68G75 181 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 ZFP36L1Q07352 338 aaKnown RBP11.05□□□□□ -0.64
SCN8A-202ENST00000355133 MRPL13Q9BYD1 178 aaKnown RBP11.05□□□□□ -0.64
SCN8A-202ENST00000355133 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 TMEM133Q9H2Q1 129 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 BRWD3Q6RI45 1802 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 IGKV1D-13A0A0B4J2D9 117 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 UPK2O00526 184 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 VENTXO95231 258 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 IGKV1-13P0DP09 117 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 IGFBP3P17936 291 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-202ENST00000355133 FLVCR1-AS1Q8TAF5 88 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 DOCK3Q8IZD9 2030 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 GNG5P63218 68 aa11.05□□□□□ -0.64
SCN8A-202ENST00000355133 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
SCN8A-202ENST00000355133 RBBP6Q7Z6E9 1792 aaKnown RBP11.05□□□□□ -0.64
SCN8A-202ENST00000355133 DNAL4O96015 105 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
SCN8A-202ENST00000355133 TRBV6-7A0A0A0MS04 114 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 A0A1B0GUT8 65 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 SNAI2O43623 268 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 CD59P13987 128 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 FOXF2Q12947 444 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 STHQ8IWL8 128 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 PRSS22Q9GZN4 317 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 CACNA1IQ9P0X4 2223 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 RAMP3O60896 148 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 NAT1P18440 290 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 MORN2Q502X0 79 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 FGFBP3Q8TAT2 258 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 FOXC2Q99958 501 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 C2orf88Q9BSF0 95 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
SCN8A-202ENST00000355133 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 ZNF525Q8N782 197 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 LDLRAD4O15165 306 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 YPEL1O60688 119 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 YPEL2Q96QA6 119 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 PRB4P10163 310 aaPredicted RBP11.03□□□□□ -0.64
SCN8A-202ENST00000355133 CACNG7P62955 275 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 EFNB1P98172 346 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 SELENOKQ9Y6D0 94 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 DDTP30046 118 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 ZNF497Q6ZNH5 498 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 IGKV1-9A0A0C4DH69 117 aa11.03□□□□□ -0.64
SCN8A-202ENST00000355133 CD7P09564 240 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms