RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 LINC00158P58513 81 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 SIRT4Q9Y6E7 314 aaPredicted RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF646O15015 1829 aaPredicted RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 C5orf67F2Z3F1 127 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 DRAM1Q8N682 238 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 RTN4RL2Q86UN3 420 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 MRPL20Q9BYC9 149 aaKnown RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 C5orf66Q9H5L9 145 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 C2orf68Q2NKX9 166 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 BHLHA9Q7RTU4 235 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 DOCK8Q8NF50 2099 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 SCO2A0A1W2PP80 73 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 LILRA1O75019 489 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 FHITP49789 147 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 FDCSPQ8NFU4 85 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 DOCK1Q14185 1865 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 A0A1B0GW15 77 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 CGAP01215 116 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 COX5BP10606 129 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 Q96M66 194 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 NPCDR1Q9BY65 106 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 GLRXP35754 106 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 TGIF1Q15583 401 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 EGR1P18146 543 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 DERL1Q9BUN8 251 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 SSBP4Q9BWG4 385 aaPredicted RBP4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 SFTA2Q6UW10 78 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 SEPSECSQ9HD40 501 aaKnown RBP4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 ELF5Q9UKW6 265 aaPredicted RBP4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF257Q9Y2Q1 563 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 EFEMP2O95967 443 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 ATP1A1-AS1Q5TC04 95 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 OR52E5Q8NH55 327 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 ASCL2Q99929 193 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 ANKRD36A6QL64 1941 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 IGHV3-11P01762 117 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 CD28P10747 220 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 IFI27L2Q9H2X8 130 aa4.9□□□□□ -1.62
SRGAP1-201ENST00000355086 DANCRP0C864 163 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 COX6A1P12074 109 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 IGFBP2P18065 325 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 APCDD1LQ8NCL9 501 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 DPM2O94777 84 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 NAPSAO96009 420 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 TMEM187Q14656 261 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 USF3Q68DE3 2245 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 ACP7Q6ZNF0 438 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 PRADC1Q9BSG0 188 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 LHFPL6Q9Y693 200 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 DDX60LQ5H9U9 1706 aaKnown RBP4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 IGHV3OR16-8A0A075B7F1 116 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 Q9H3A6 140 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 TRAV8-4A0A0B4J246 113 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 IRF3Q14653 427 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 GFI1BQ5VTD9 330 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF600Q6ZNG1 722 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 COLCA1Q6ZS62 124 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 PHF3Q92576 2039 aaKnown RBP4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 GGACTQ9BVM4 153 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 LTBRP36941 435 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 TRBV5-5A0A0J9YX44 114 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF585BQ52M93 769 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 VKORC1Q9BQB6 163 aa4.9□□□□□ -1.63
SRGAP1-201ENST00000355086 HIGD1CA8MV81 97 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 SLC17A3O00476 420 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 HLA-DQB1P01920 261 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 SRSF4Q08170 494 aaKnown RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 OR13A1Q8NGR1 328 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 PILRBQ9UKJ0 227 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 PGPEP1LA6NFU8 196 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 TRAV14DV4A0A0A6YYC5 116 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 RPL32P62910 135 aaKnown RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 RSPO4Q2I0M5 234 aaPredicted RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 Q6ZT83 130 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 OSR1Q8TAX0 266 aaPredicted RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 HS3ST3B1Q9Y662 390 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 ZIC4Q8N9L1 334 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 ANAPC13Q9BS18 74 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 A0A1W2PQF6 199 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 VENTXO95231 258 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 A0A0U1RRA0 63 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 MS4A6AQ9H2W1 248 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 OTORQ9NRC9 128 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 NHP2Q9NX24 153 aaKnown RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 A0A087WX48 190 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 ZNF562Q6V9R5 426 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 SRD5A1P18405 259 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 C1orf53Q5VUE5 145 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 GDF15Q99988 308 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 RBM38Q9H0Z9 239 aaKnown RBP4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 TMEM249Q2WGJ8 235 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 ASCL4Q6XD76 172 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 TJP1Q07157 1748 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 PRSS23O95084 383 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 ASPHD2Q6ICH7 369 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 PRSS22Q9GZN4 317 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 INS-IGF2F8WCM5 200 aa4.89□□□□□ -1.63
SRGAP1-201ENST00000355086 F8WEM9 126 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms