RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PINX1Q96BK5 328 aaKnown RBP12.39□□□□□ -0.43
CTSA-202ENST00000354880 ATP5SQ99766 215 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 TEX22C9J3V5 150 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 DFFBO76075 338 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 IFNA7P01567 189 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 CX3CL1P78423 397 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 EXOSC2Q13868 293 aaKnown RBP12.39□□□□□ -0.43
CTSA-202ENST00000354880 C2orf83Q53S99 150 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 ETV3LQ6ZN32 361 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 HSD17B13Q7Z5P4 300 aaPredicted RBP12.39□□□□□ -0.43
CTSA-202ENST00000354880 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 MOB4Q9Y3A3 225 aa12.39□□□□□ -0.43
CTSA-202ENST00000354880 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
CTSA-202ENST00000354880 IFNA4P05014 189 aa12.38□□□□□ -0.43
CTSA-202ENST00000354880 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
CTSA-202ENST00000354880 LY6EQ16553 131 aa12.38□□□□□ -0.43
CTSA-202ENST00000354880 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
CTSA-202ENST00000354880 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
CTSA-202ENST00000354880 SONP18583 2426 aaKnown RBP12.38□□□□□ -0.43
CTSA-202ENST00000354880 A6NDX4 124 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 FGF16O43320 207 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 APELAP0DMC3 54 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 ATP6V1FQ16864 119 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 C5orf56Q8N8D9 126 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 SSMEM1Q8WWF3 244 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 IGHV7-81A0A0B4J1V7 117 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 PRSS46E5RG02 174 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 REG1AP05451 166 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 AREGP15514 252 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTSA-202ENST00000354880 TUSC1Q2TAM9 212 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 SPNS3Q6ZMD2 512 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 ABHD5Q8WTS1 349 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 PHYHIPLQ96FC7 376 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 P2RX4Q99571 388 aa12.37□□□□□ -0.43
CTSA-202ENST00000354880 FAM103A1Q9BTL3 118 aaKnown RBP12.37□□□□□ -0.43
CTSA-202ENST00000354880 BAHCC1Q9P281 2608 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 IER3P46695 156 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 NDPQ00604 133 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 IL17RELQ6ZVW7 336 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 ARV1Q9H2C2 271 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 YAE1D1Q9NRH1 226 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 UBQLN2Q9UHD9 624 aa12.36□□□□□ -0.43
CTSA-202ENST00000354880 IFNA5P01569 189 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 IGHV4-59P01825 116 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 SLC25A24Q6NUK1 477 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 ZNF114Q8NC26 417 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 HSPB9Q9BQS6 159 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 TMEM147Q9BVK8 224 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 GGACTQ9BVM4 153 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
CTSA-202ENST00000354880 Q6YL49 198 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 C16orf82Q7Z2V1 217 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 SCARB1Q8WTV0 552 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 ZNF48Q96MX3 618 aaPredicted RBP12.34□□□□□ -0.43
CTSA-202ENST00000354880 PRDM13Q9H4Q3 707 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 UBE2L5PA0A1B0GUS4 154 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 M0QZK8 103 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 AMY1AP04745 511 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 SRP14P37108 136 aaKnown RBP12.34□□□□□ -0.43
CTSA-202ENST00000354880 DLK1P80370 383 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 VWC2Q2TAL6 325 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
CTSA-202ENST00000354880 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 TMED6Q8WW62 240 aa12.34□□□□□ -0.43
CTSA-202ENST00000354880 BTBD17A6NE02 478 aa12.33□□□□□ -0.44
CTSA-202ENST00000354880 SH2D7A6NKC9 451 aaPredicted RBP12.33□□□□□ -0.44
CTSA-202ENST00000354880 FBXO24O75426 580 aa12.33□□□□□ -0.44
CTSA-202ENST00000354880 CTRB1P17538 263 aa12.33□□□□□ -0.44
CTSA-202ENST00000354880 CTRB2Q6GPI1 263 aa12.33□□□□□ -0.44
CTSA-202ENST00000354880 SCGB1C1Q8TD33 95 aa12.33□□□□□ -0.44
CTSA-202ENST00000354880 RNASEH2CQ8TDP1 164 aaKnown RBP12.33□□□□□ -0.44
CTSA-202ENST00000354880 PARD6GQ9BYG4 376 aaPredicted RBP12.33□□□□□ -0.44
CTSA-202ENST00000354880 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
CTSA-202ENST00000354880 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
CTSA-202ENST00000354880 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
CTSA-202ENST00000354880 HNF1AP20823 631 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 ATP6V0CP27449 155 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 WDR61Q9GZS3 305 aaKnown RBP12.32□□□□□ -0.44
CTSA-202ENST00000354880 PARP11Q9NR21 331 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 SPP1P10451 314 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 RUNX1Q01196 453 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
CTSA-202ENST00000354880 ASPHD1Q5U4P2 390 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 PVRIGQ6DKI7 326 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 C19orf35Q6ZS72 473 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 LFNGQ8NES3 379 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 SGMS2Q8NHU3 365 aa12.32□□□□□ -0.44
CTSA-202ENST00000354880 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
CTSA-202ENST00000354880 GNPNAT1Q96EK6 184 aaPredicted RBP12.32□□□□□ -0.44
CTSA-202ENST00000354880 WNT10AQ9GZT5 417 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms