RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RPL29P47914 159 aaKnown RBP15.97■□□□□ 0.15
COL13A1-201ENST00000354547 FAM222BQ8WU58 562 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 RAB9BQ9NP90 201 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 PRNDQ9UKY0 176 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 CD99P14209 185 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 ERVFC1-1P60608 527 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 SLC35B1P78383 322 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 FOXL1Q12952 345 aa15.97■□□□□ 0.15
COL13A1-201ENST00000354547 MRPL20Q9BYC9 149 aaKnown RBP15.97■□□□□ 0.15
COL13A1-201ENST00000354547 RPUSD1Q9UJJ7 312 aaKnown RBP15.97■□□□□ 0.15
COL13A1-201ENST00000354547 A0A1B0GV90 55 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 UPK2O00526 184 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 MT-CO2P00403 227 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 GATA4P43694 442 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 RNASEH2CQ8TDP1 164 aaKnown RBP15.96■□□□□ 0.15
COL13A1-201ENST00000354547 ADTRPQ96IZ2 230 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 UHRF2Q96PU4 802 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 A8MXE2 369 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 DOLPP1Q86YN1 238 aa15.96■□□□□ 0.15
COL13A1-201ENST00000354547 RBMXL3Q8N7X1 1067 aaKnown RBP15.96■□□□□ 0.15
COL13A1-201ENST00000354547 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.96■□□□□ 0.15
COL13A1-201ENST00000354547 PDLIM4P50479 330 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 PRR20EP86478 221 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 PRR20CP86479 221 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 PRR20DP86480 221 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 PRR20BP86481 221 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 PRR20AP86496 221 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 DIAPH2-AS1Q14236 149 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 GBGT1Q8N5D6 347 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 CCL17Q92583 94 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 NEUROG1Q92886 237 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 HARBI1Q96MB7 349 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 SLC25A10Q9UBX3 287 aaPredicted RBP15.95■□□□□ 0.14
COL13A1-201ENST00000354547 FXYD3Q14802 87 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 SLC25A48Q6ZT89 311 aaKnown RBP15.95■□□□□ 0.14
COL13A1-201ENST00000354547 OR2T6Q8NHC8 308 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 CEP295Q9C0D2 2601 aa15.95■□□□□ 0.14
COL13A1-201ENST00000354547 PRCDQ00LT1 54 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 PQLC2Q6ZP29 291 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 Q6ZS92 163 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 SLC45A2Q9UMX9 530 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 CUL9Q8IWT3 2517 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 hADV38S2A0JD32 116 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 CCKARP32238 428 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 IER3P46695 156 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 USF2Q15853 346 aaPredicted RBP15.94■□□□□ 0.14
COL13A1-201ENST00000354547 C10orf55Q5SWW7 151 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 REC114Q7Z4M0 266 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 E7EUB6 86 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 TM4SF5O14894 197 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 TCL1AP56279 114 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 SUMO1P63165 101 aaKnown RBP15.94■□□□□ 0.14
COL13A1-201ENST00000354547 EAF1Q96JC9 268 aaPredicted RBP15.94■□□□□ 0.14
COL13A1-201ENST00000354547 TXNDC17Q9BRA2 123 aa15.94■□□□□ 0.14
COL13A1-201ENST00000354547 RNASE7Q9H1E1 156 aaKnown RBP15.94■□□□□ 0.14
COL13A1-201ENST00000354547 TRAV5A0A0B4J249 113 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 HELTA6NFD8 242 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 ITGB1BP1O14713 200 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 PRB3Q04118 309 aaPredicted RBP15.93■□□□□ 0.14
COL13A1-201ENST00000354547 CENPWQ5EE01 88 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 NHLRC2Q8NBF2 726 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 COMMD5Q9GZQ3 224 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 OR8I2Q8N0Y5 310 aa15.93■□□□□ 0.14
COL13A1-201ENST00000354547 GNG4P50150 75 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 SFXN3Q9BWM7 321 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 NBASA2RRP1 2371 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 BSNQ9UPA5 3926 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 SPTA1P02549 2419 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 GCGP01275 180 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 SSBP2P81877 361 aaPredicted RBP15.92■□□□□ 0.14
COL13A1-201ENST00000354547 MORN5Q5VZ52 161 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 TMEM108Q6UXF1 575 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 OR1L6Q8NGR2 347 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 FCN1O00602 326 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 RNF224P0DH78 156 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 MGST1P10620 155 aaKnown RBP15.92■□□□□ 0.14
COL13A1-201ENST00000354547 KRTCAP3Q53RY4 240 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 CORO2AQ92828 525 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 ZNF503Q96F45 646 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 IL36BQ9NZH7 164 aa15.92■□□□□ 0.14
COL13A1-201ENST00000354547 ZNF318Q5VUA4 2279 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 APELAP0DMC3 54 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 SSX2Q16385 188 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 IGFL3Q6UXB1 125 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 LHFPL4Q7Z7J7 247 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 MMD2Q8IY49 270 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 MS4A10Q96PG2 267 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 MRPL18Q9H0U6 180 aaKnown RBP15.91■□□□□ 0.14
COL13A1-201ENST00000354547 FKBP11Q9NYL4 201 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 NKX6-3A6NJ46 265 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 BSPH1Q075Z2 132 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 LYPD2Q6UXB3 125 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 OR10X1Q8NGY0 326 aa15.91■□□□□ 0.14
COL13A1-201ENST00000354547 TECRQ9NZ01 308 aaKnown RBP15.91■□□□□ 0.14
COL13A1-201ENST00000354547 DPRXA6NFQ7 191 aa15.9■□□□□ 0.14
COL13A1-201ENST00000354547 REG1AP05451 166 aa15.9■□□□□ 0.14
COL13A1-201ENST00000354547 RNASE2P10153 161 aaKnown RBP15.9■□□□□ 0.14
COL13A1-201ENST00000354547 DLX1P56177 255 aa15.9■□□□□ 0.14
COL13A1-201ENST00000354547 DNLZQ5SXM8 178 aa15.9■□□□□ 0.14
COL13A1-201ENST00000354547 SERTAD4Q9NUC0 356 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms