RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR52B4Q8NGK2 314 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 MITD1Q8WV92 249 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 SECTM1Q8WVN6 248 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 TMED6Q8WW62 240 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 EMG1Q92979 244 aaKnown RBP8.76□□□□□ -1.01
RTN3-204ENST00000354497 RPEQ96AT9 228 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 RPUSD4Q96CM3 377 aaKnown RBP8.76□□□□□ -1.01
RTN3-204ENST00000354497 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 TTTY10Q9BZA0 68 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 RBKSQ9H477 322 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 FAM206AQ9NX38 181 aa8.76□□□□□ -1.01
RTN3-204ENST00000354497 SIRT4Q9Y6E7 314 aaPredicted RBP8.76□□□□□ -1.01
RTN3-204ENST00000354497 TRGV10A0A0A0MS01 117 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 RBMY1BA6NDE4 496 aaKnown RBP8.75□□□□□ -1.01
RTN3-204ENST00000354497 RBMY1EA6NEQ0 496 aaKnown RBP8.75□□□□□ -1.01
RTN3-204ENST00000354497 H3BN98 237 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 CRYGCP07315 174 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 RBMY1DP0C7P1 496 aaKnown RBP8.75□□□□□ -1.01
RTN3-204ENST00000354497 DUSP1P28562 367 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 LPAR6P43657 344 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 ERVK11-1P61568 191 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
RTN3-204ENST00000354497 HLA-DRB5Q30154 266 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 OCIAD2Q56VL3 154 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 CEACAM19Q7Z692 300 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 DRAM1Q8N682 238 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 ZNF738Q8NE65 137 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 OR4D6Q8NGJ1 314 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 Q8WTZ3 238 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 FRZBQ92765 325 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 CPNE2Q96FN4 548 aaPredicted RBP8.75□□□□□ -1.01
RTN3-204ENST00000354497 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 SRD5A3Q9H8P0 318 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 WFDC1Q9HC57 220 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 CMC2Q9NRP2 79 aa8.75□□□□□ -1.01
RTN3-204ENST00000354497 UBE2J1Q9Y385 318 aaPredicted RBP8.75□□□□□ -1.01
RTN3-204ENST00000354497 TGIF2-C20orf24A0A0A6YYL0 155 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 A0A1B0GV72 72 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 C5orf51A6NDU8 294 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 DHRS7CA6NNS2 312 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 K7EPK0 472 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 DHRS3O75911 302 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 IGLV1-47P01700 117 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 SEC11BP0C7V7 166 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 GTF2F2P13984 249 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 CD34P28906 385 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 IL24Q13007 206 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 SRSF7Q16629 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
RTN3-204ENST00000354497 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 PRSS54Q6PEW0 395 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 FAM89BQ8N5H3 189 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 FAM71E2Q8N5Q1 922 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 TMEM229BQ8NBD8 167 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 OR11H1Q8NG94 326 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 OR4C16Q8NGL9 310 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 OR4S2Q8NH73 311 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 PKIBQ9C010 78 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 EDA2RQ9HAV5 297 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 IL36RNQ9UBH0 155 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 ST3GAL6Q9Y274 331 aa8.74□□□□□ -1.01
RTN3-204ENST00000354497 ALMS1Q8TCU4 4167 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 TMEM235A6NFC5 223 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 OOSP1A8MZH6 123 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 RAB27BO00194 218 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 SIRPB1O00241 398 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 MGST3O14880 152 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 PSPNO60542 156 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 SAP30O75446 220 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 IGHG2P01859 326 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 TRGC2P03986 189 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 PET100P0DJ07 73 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 SERPINA2P20848 420 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 INSL3P51460 131 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 ODF4Q2M2E3 257 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 ACSM3Q53FZ2 586 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 LHFPL2Q6ZUX7 228 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 FAM220AQ7Z4H9 259 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 SLC25A42Q86VD7 318 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 GPR148Q8TDV2 347 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 PGLYRP3Q96LB9 341 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 MTCH1Q9NZJ7 389 aa8.73□□□□□ -1.01
RTN3-204ENST00000354497 IFITM5A6NNB3 132 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 NCBP2LA6PVI3 153 aaKnown RBP8.72□□□□□ -1.01
RTN3-204ENST00000354497 LY6LH3BQJ8 138 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 H3BSH0 61 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 IGKV1D-33P01593 117 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 IGKV1-33P01594 117 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 IGHV3-7P01780 117 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
RTN3-204ENST00000354497 GP9P14770 177 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 PGAM2P15259 253 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 RPL29P47914 159 aaKnown RBP8.72□□□□□ -1.01
RTN3-204ENST00000354497 RAB11AP62491 216 aa8.72□□□□□ -1.01
RTN3-204ENST00000354497 MFGE8Q08431 387 aaPredicted RBP8.72□□□□□ -1.01
RTN3-204ENST00000354497 FOXE3Q13461 319 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms