RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 TRPM7Q96QT4 1865 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 IGHV1-18A0A0C4DH31 117 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 IGFBP2P18065 325 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 HIST1H1AQ02539 215 aaPredicted RBP15.61■□□□□ 0.09
UBE3C-201ENST00000348165 TTC32Q5I0X7 151 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 GLRX5Q86SX6 157 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 SYT8Q8NBV8 401 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 DOCK7Q96N67 2140 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 ICAM4Q14773 271 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 IGKV1D-13A0A0B4J2D9 117 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 FOXI3A8MTJ6 420 aaPredicted RBP15.61■□□□□ 0.09
UBE3C-201ENST00000348165 IGKV1-13P0DP09 117 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.61■□□□□ 0.09
UBE3C-201ENST00000348165 NPCDR1Q9BY65 106 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.61■□□□□ 0.097e-7■■■■■ 33.8
UBE3C-201ENST00000348165 FER1L5A0AVI2 2057 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 CD24P25063 80 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 ALKBH7Q9BT30 221 aaPredicted RBP15.61■□□□□ 0.09
UBE3C-201ENST00000348165 A0A0G2JMZ2 1700 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 LRRC37A2A6NM11 1700 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 OR4C46A6NHA9 309 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 M0R3E3 92 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 RAB9AP51151 201 aa15.61■□□□□ 0.09
UBE3C-201ENST00000348165 PSMG3Q9BT73 122 aaPredicted RBP15.61■□□□□ 0.09
UBE3C-201ENST00000348165 MRPL32Q9BYC8 188 aaKnown RBP15.61■□□□□ 0.09
UBE3C-201ENST00000348165 NDUFS8O00217 210 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 HLA-DQA1P01909 254 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 FAM90A1Q86YD7 464 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 PEF1Q9UBV8 284 aaKnown RBP15.6■□□□□ 0.09
UBE3C-201ENST00000348165 E9PLN8 166 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 GGNQ86UU5 652 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 VKORC1Q9BQB6 163 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 MRPL18Q9H0U6 180 aaKnown RBP15.6■□□□□ 0.09
UBE3C-201ENST00000348165 PF4P02776 101 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 TFF3Q07654 80 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 NIT1Q86X76 327 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 ZNF256Q9Y2P7 627 aaPredicted RBP15.6■□□□□ 0.09
UBE3C-201ENST00000348165 GPR183P32249 361 aa15.6■□□□□ 0.09
UBE3C-201ENST00000348165 MBNL2Q5VZF2 373 aaKnown RBP15.6■□□□□ 0.09
UBE3C-201ENST00000348165 TRBV6-7A0A0A0MS04 114 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 NBEAP1P0C6P0 100 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 FAM74A4Q5TZK3 123 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 OR1N2Q8NGR9 330 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 GATA2P23769 480 aaPredicted RBP15.59■□□□□ 0.09
UBE3C-201ENST00000348165 AMMECR1LQ6DCA0 310 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 PPP1R27Q86WC6 154 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 Q0VFX4 171 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 C21orf62Q9NYP8 219 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 CDC42EP3Q9UKI2 254 aa15.59■□□□□ 0.09
UBE3C-201ENST00000348165 MED13LQ71F56 2210 aa15.58■□□□□ 0.09
UBE3C-201ENST00000348165 DOCK10Q96BY6 2186 aa15.58■□□□□ 0.09
UBE3C-201ENST00000348165 SNRPD3P62318 126 aaKnown RBP15.58■□□□□ 0.09
UBE3C-201ENST00000348165 FAM53AQ6NSI3 398 aaPredicted RBP15.58■□□□□ 0.09
UBE3C-201ENST00000348165 TRAV24A0A0B4J272 114 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 ZNF646O15015 1829 aaPredicted RBP15.58■□□□□ 0.08
UBE3C-201ENST00000348165 SAA2-SAA4A0A096LPE2 208 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 NPIPB6E9PJ23 425 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 SAA2P0DJI9 122 aaPredicted RBP15.58■□□□□ 0.08
UBE3C-201ENST00000348165 CCL1P22362 96 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 CGAP01215 116 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 IGHV3-11P01762 117 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 SRSF6Q13247 344 aaKnown RBP15.58■□□□□ 0.08
UBE3C-201ENST00000348165 CENPWQ5EE01 88 aa15.58■□□□□ 0.08
UBE3C-201ENST00000348165 DLX6P56179 175 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 CLDND2Q8NHS1 167 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 ARPC1AQ92747 370 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 AREGP15514 252 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 EFNB1P98172 346 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 PAQR4Q8N4S7 273 aaPredicted RBP15.57■□□□□ 0.08
UBE3C-201ENST00000348165 ZNF324O75467 553 aaPredicted RBP15.57■□□□□ 0.08
UBE3C-201ENST00000348165 RTN4RL2Q86UN3 420 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 LEPROTL1O95214 131 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 SLC25A28Q96A46 364 aa15.57■□□□□ 0.08
UBE3C-201ENST00000348165 SAA1P0DJI8 122 aaPredicted RBP15.56■□□□□ 0.08
UBE3C-201ENST00000348165 FOLR2P14207 255 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 GCSHP23434 173 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 TBR1Q16650 682 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 LURAP1LQ8IV03 231 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 KLK15Q9H2R5 256 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 FAM181BA6NEQ2 426 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 CRYGSP22914 178 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 TSPOP30536 169 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 SRIP30626 198 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 HEATR1Q9H583 2144 aaKnown RBP15.56■□□□□ 0.08
UBE3C-201ENST00000348165 LOC107984156A0A0G2JMH3 177 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 J3QRE1 110 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 CA7P43166 264 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 ARL17AQ8IVW1 177 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 RPS20P60866 119 aaKnown RBP15.56■□□□□ 0.08
UBE3C-201ENST00000348165 CLEC19AQ6UXS0 136 aa15.56■□□□□ 0.08
UBE3C-201ENST00000348165 ATOH7Q8N100 152 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 WNT10AQ9GZT5 417 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 MORN2Q502X0 79 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 SAMD13Q5VXD3 122 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 DMRTA2Q96SC8 542 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 TMEM238LA0A1B0GVL6 79 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 GRIFINA4D1Z8 144 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 A6NJY4 79 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 IGKV1-12A0A0C4DH73 117 aa15.55■□□□□ 0.08
UBE3C-201ENST00000348165 UBE2CO00762 179 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms