RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CTXND1A0A1B0GTU2 59 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 NDUFB4O95168 129 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 IGFL3Q6UXB1 125 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 PRNTQ86SH4 94 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 PRSS2P07478 247 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 WNT5AP41221 380 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 QRFPP83859 136 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 FAM89BQ8N5H3 189 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 LINC00587B1AMM8 73 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 MSMBP08118 114 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 FAM157CP0CG43 387 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 HERPUD1Q15011 391 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 IGHV3-11P01762 117 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 GGACTQ9BVM4 153 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 FAM90A26D6RGX4 464 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 SRSF10O75494 262 aaKnown RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 IGKV3-20P01619 116 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 LEPP41159 167 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 PSG7Q13046 419 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 HLA-DRB5Q30154 266 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 TEX38Q6PEX7 206 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 FAM131CQ96AQ9 280 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 PNRC2Q9NPJ4 139 aaKnown RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 KLF2Q9Y5W3 355 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 SSTR5P35346 364 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 TCF15Q12870 199 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 ZNF56Q15929 161 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 MRPL54Q6P161 138 aaKnown RBP9.1□□□□□ -0.95
CLCN6-202ENST00000346436 DRAM1Q8N682 238 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 OR10G8Q8NGN5 311 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 CYYR1Q96J86 154 aa9.1□□□□□ -0.95
CLCN6-202ENST00000346436 IL6RP08887 468 aaPredicted RBP9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CCL1P22362 96 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CAMPP49913 170 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 UCP3P55916 312 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 C17orf82Q86X59 251 aaPredicted RBP9.09□□□□□ -0.95
CLCN6-202ENST00000346436 C19orf24Q9BVV8 132 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 DEPPQ9NTK1 212 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 FOXA2Q9Y261 457 aaPredicted RBP9.09□□□□□ -0.95
CLCN6-202ENST00000346436 IL4P05112 153 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 IER3P46695 156 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM158Q8WZ71 300 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 IGHV1-18A0A0C4DH31 117 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CGB1A6NKQ9 187 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 M0R1W7 72 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 PAX1P15863 534 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 C18orf12Q96KH6 178 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 FBLN5Q9UBX5 448 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 IGLV3-32A0A0A0MS00 114 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 PINLYPA6NC86 204 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 PDE6DO43924 150 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 GPR183P32249 361 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CR1LQ2VPA4 569 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CLEC19AQ6UXS0 136 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 MDS2Q8NDY4 140 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CLDND2Q8NHS1 167 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 SGMS2Q8NHU3 365 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 MRAP2Q96G30 205 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 OR51M1Q9H341 326 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 LRRK1Q38SD2 2015 aa9.09□□□□□ -0.95
CLCN6-202ENST00000346436 CBY3A6NI87 242 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 IGHG3P01860 377 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 MIC13Q5XKP0 118 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 LHFPL1Q86WI0 220 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 FAM216AQ8WUB2 273 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 RAB24Q969Q5 203 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 COL4A3Q01955 1670 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 A0A1B0GUS0 222 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 CELA3BP08861 270 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 SRP19P09132 144 aaKnown RBP9.08□□□□□ -0.96
CLCN6-202ENST00000346436 SERF2P84101 59 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 RNASEKQ6P5S7 137 aaKnown RBP9.08□□□□□ -0.96
CLCN6-202ENST00000346436 PIP4P1Q86T03 277 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 OR51G1Q8NGK1 321 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 NABP1Q96AH0 204 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 HSPB7Q9UBY9 170 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 TBL2Q9Y4P3 447 aaKnown RBP9.08□□□□□ -0.96
CLCN6-202ENST00000346436 MPZP25189 248 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
CLCN6-202ENST00000346436 TNFRSF18Q9Y5U5 241 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 PQLC2LA1A4F0 135 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 ANOS1P23352 680 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 DPPA3Q6W0C5 159 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 DTX1Q86Y01 620 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 KLHDC1Q8N7A1 406 aa9.08□□□□□ -0.96
CLCN6-202ENST00000346436 TRAV41A0A0B4J266 112 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 TMEM155Q4W5P6 130 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 C1QTNF5Q9BXJ0 243 aa9.07□□□□□ -0.96
CLCN6-202ENST00000346436 SMDT1Q9H4I9 107 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms