RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PPIAL4FP0DN26 164 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 CDKN1AP38936 164 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 HERVK_113P61574 105 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 OR1L8Q8NGR8 309 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 GATAD1Q8WUU5 269 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 SLC25A10Q9UBX3 287 aaPredicted RBP13.06□□□□□ -0.32
SRPK1-201ENST00000346162 A0A0G2JLM5 398 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 A0A1W2PRD5 423 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 A0A1W2PRF3 423 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 A0A1W2PRM7 423 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 GPX1P07203 203 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 LYL1P12980 280 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 C18orf12Q96KH6 178 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 HBBP68871 147 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
SRPK1-201ENST00000346162 J3QW42 95 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 CCL25O15444 150 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 PFN1P07737 140 aaKnown RBP13.05□□□□□ -0.32
SRPK1-201ENST00000346162 REG1BP48304 166 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 FDCSPQ8NFU4 85 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 REPIN1Q9BWE0 567 aaKnown RBP13.05□□□□□ -0.32
SRPK1-201ENST00000346162 GNB1LQ9BYB4 327 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 PRSS47A8MTI9 375 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 C1QTNF5Q9BXJ0 243 aa13.05□□□□□ -0.32
SRPK1-201ENST00000346162 FAM157AC9JC47 383 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 IGLC2P0DOY2 106 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 CD40P25942 277 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 KRTCAP3Q53RY4 240 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 TMEM177Q53S58 311 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 NHP2Q9NX24 153 aaKnown RBP13.04□□□□□ -0.32
SRPK1-201ENST00000346162 A0A087X0K7 114 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 H7C2G1 150 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 Q6ZT83 130 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 WBP1Q96G27 269 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 CITED1Q99966 193 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 CLDN18P56856 261 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 SPSB3Q6PJ21 355 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 LHFPL1Q86WI0 220 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 FER1L6-AS1Q8NA97 138 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 GP6Q9HCN6 339 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 S100A4P26447 101 aaKnown RBP13.04□□□□□ -0.32
SRPK1-201ENST00000346162 LYZP61626 148 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
SRPK1-201ENST00000346162 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 TTC9CQ8N5M4 171 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 CRIM1Q9NZV1 1036 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
SRPK1-201ENST00000346162 TRAV8-6A0A0B4J262 113 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 CD5LO43866 347 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 CLPSP04118 112 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 TFF3Q07654 80 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 LINC01551Q86U37 167 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 RNASE7Q9H1E1 156 aaKnown RBP13.03□□□□□ -0.32
SRPK1-201ENST00000346162 PTGDSP41222 190 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 ID3Q02535 119 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 RSPO3Q9BXY4 272 aaPredicted RBP13.03□□□□□ -0.32
SRPK1-201ENST00000346162 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 CCL1P22362 96 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 DRAM1Q8N682 238 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF785A8K8V0 405 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 SMIM17P0DL12 118 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 CKS2P33552 79 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 GCSAMQ8N6F7 178 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 LRTM2Q8N967 370 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF502Q8TBZ5 544 aa13.03□□□□□ -0.32
SRPK1-201ENST00000346162 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
SRPK1-201ENST00000346162 IGHV2OR16-5A0A0B4J2B6 119 aa13.02□□□□□ -0.32
SRPK1-201ENST00000346162 RRHO14718 337 aa13.02□□□□□ -0.32
SRPK1-201ENST00000346162 SFXN3Q9BWM7 321 aa13.02□□□□□ -0.32
SRPK1-201ENST00000346162 IL6RP08887 468 aaPredicted RBP13.02□□□□□ -0.33
SRPK1-201ENST00000346162 RPL8P62917 257 aaKnown RBP13.02□□□□□ -0.33
SRPK1-201ENST00000346162 Q6ZVH6 145 aa13.02□□□□□ -0.33
SRPK1-201ENST00000346162 LYZL4Q96KX0 146 aa13.02□□□□□ -0.33
SRPK1-201ENST00000346162 C19orf24Q9BVV8 132 aa13.02□□□□□ -0.33
SRPK1-201ENST00000346162 CSTL1Q9H114 145 aa13.02□□□□□ -0.33
SRPK1-201ENST00000346162 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.33
SRPK1-201ENST00000346162 CALYQ9NYX4 217 aa13.02□□□□□ -0.33
SRPK1-201ENST00000346162 TMEM171Q8WVE6 324 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 SSBP4Q9BWG4 385 aaPredicted RBP13.01□□□□□ -0.33
SRPK1-201ENST00000346162 UFC1Q9Y3C8 167 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 MRPS18CQ9Y3D5 142 aaKnown RBP13.01□□□□□ -0.33
SRPK1-201ENST00000346162 TIMP3P35625 211 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 PRNTQ86SH4 94 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 PLPPR1Q8TBJ4 325 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 IGKV1D-8A0A087WSZ0 117 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 PGPA6NDG6 321 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 CGAP01215 116 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 C8orf88P0DMB2 117 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 PSG9Q00887 426 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms