RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 NUDT15Q9NV35 164 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 PKD1L1Q8TDX9 2849 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 C9orf170A2RU37 121 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 FAM223BA6NKX1 122 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 CYB5BO43169 146 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 ATP5G2Q06055 141 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 ETV3LQ6ZN32 361 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 FAM223AQ8IWN6 122 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 NECAP1Q8NC96 275 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 OR1N2Q8NGR9 330 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 ENKURQ8TC29 256 aa16.13■□□□□ 0.17
SMARCB1-202ENST00000344921 TRBV9A0A0B4J1U6 114 aa16.12■□□□□ 0.17
SMARCB1-202ENST00000344921 HIST1H1BP16401 226 aaKnown RBP16.12■□□□□ 0.17
SMARCB1-202ENST00000344921 RUNX1Q01196 453 aa16.12■□□□□ 0.17
SMARCB1-202ENST00000344921 NEURL2Q9BR09 285 aa16.12■□□□□ 0.17
SMARCB1-202ENST00000344921 FBXL7Q9UJT9 491 aa16.12■□□□□ 0.17
SMARCB1-202ENST00000344921 SULT1A3P0DMM9 295 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 SULT1A4P0DMN0 295 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 DEFA1P59665 94 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 DEFA3P59666 94 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 ERHP84090 104 aaKnown RBP16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 ZNF616Q08AN1 781 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 DHRS2Q13268 280 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 C15orf32Q32M92 178 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 LYG2Q86SG7 212 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 P2RX4Q99571 388 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 ENY2Q9NPA8 101 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 DUXBA0A1W2PPF3 345 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 ANKRD34BA5PLL1 514 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 BOLA2-SMG1P6H3BVE0 249 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 HOXA1P49639 335 aaPredicted RBP16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 SLC25A24Q6NUK1 477 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 LRTM2Q8N967 370 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 COQ8AQ8NI60 647 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 FANCD2OSQ96PS1 177 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 THYN1Q9P016 225 aa16.11■□□□□ 0.17
SMARCB1-202ENST00000344921 NXPH3O95157 252 aa16.1■□□□□ 0.17
SMARCB1-202ENST00000344921 HOXB5P09067 269 aa16.1■□□□□ 0.17
SMARCB1-202ENST00000344921 H2AFB2P0C5Z0 115 aa16.1■□□□□ 0.17
SMARCB1-202ENST00000344921 LINC01619G3V211 115 aa16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 HSPB1P04792 205 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 EXOSC2Q13868 293 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 SMCO1Q147U7 214 aa16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 NMSQ5H8A3 153 aa16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 LINC00482Q8N8I6 264 aa16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 RANGRFQ9HD47 186 aaPredicted RBP16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 TMED3Q9Y3Q3 217 aa16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 F11RQ9Y624 299 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-202ENST00000344921 IGLV11-55A0A075B6I3 123 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 IGHV4OR15-8A0A075B7B6 117 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 A0A087WW49 117 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 NDUFB8O95169 186 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 DUS4LO95620 317 aaKnown RBP16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 OR8U8P0C7N1 319 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 SNCAP37840 140 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 SPCS3P61009 180 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 OR1S1Q8NH92 325 aa16.08■□□□□ 0.17
SMARCB1-202ENST00000344921 ZNF343Q6P1L6 599 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 OR2C3Q8N628 320 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 OR52B4Q8NGK2 314 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 OR1L6Q8NGR2 347 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 OR52E5Q8NH55 327 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 PEF1Q9UBV8 284 aaKnown RBP16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 CACFD1Q9UGQ2 172 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 S4R3C0 116 aa16.08■□□□□ 0.16
SMARCB1-202ENST00000344921 A0A1B0GU03 582 aa16.07■□□□□ 0.16
SMARCB1-202ENST00000344921 CEBPZOSA8MTT3 80 aa16.07■□□□□ 0.16
SMARCB1-202ENST00000344921 FHL3Q13643 280 aa16.07■□□□□ 0.16
SMARCB1-202ENST00000344921 IGHV3-23P01764 117 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 AARDQ4LEZ3 155 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 NRARPQ7Z6K4 114 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 WFDC9Q8NEX5 89 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 OR1P1Q8NH06 330 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 EEF1AKMT3Q96AZ1 226 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 CXorf58Q96LI9 332 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 DMRT1Q9Y5R6 373 aa16.06■□□□□ 0.16
SMARCB1-202ENST00000344921 SLURP1P55000 103 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 GGNBP1Q5YKI7 109 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 HEYLQ9NQ87 328 aaPredicted RBP16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 ADAP1O75689 374 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 IFNA21P01568 189 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 SUB1P53999 127 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 MFAP2P55001 183 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 KLK9Q2XQG4 91 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 MISP3Q96FF7 219 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 KLK9Q9UKQ9 250 aa16.05■□□□□ 0.16
SMARCB1-202ENST00000344921 MGAM2Q2M2H8 2515 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 MFSD2BA6NFX1 497 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 TRBV12-3P01733 135 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 IGLL1P15814 213 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 TNFRSF9Q07011 255 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 PLET1Q6UQ28 207 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 UXS1Q8NBZ7 420 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 ZNF114Q8NC26 417 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 DUSP18Q8NEJ0 188 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 MITD1Q8WV92 249 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 RCC1LQ96I51 464 aaKnown RBP16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 SEC22CQ9BRL7 303 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 HIPK2Q9H2X6 1198 aa16.04■□□□□ 0.16
SMARCB1-202ENST00000344921 CMYA5Q8N3K9 4069 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms