RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ATRAIDQ6UW56 229 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 RCC1LQ96I51 464 aaKnown RBP10.84□□□□□ -0.67
CDC42-202ENST00000344548 EAF1Q96JC9 268 aaPredicted RBP10.84□□□□□ -0.67
CDC42-202ENST00000344548 RARRES2Q99969 163 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 IGLC7A0M8Q6 106 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 SNRNP70P08621 437 aaKnown RBP10.84□□□□□ -0.67
CDC42-202ENST00000344548 OR13C7P0DN81 318 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 SAA4P35542 130 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 RAB11AP62491 216 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 FAM120AOSQ5T036 256 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 P2RX4Q99571 388 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
CDC42-202ENST00000344548 POLR3KQ9Y2Y1 108 aaPredicted RBP10.84□□□□□ -0.67
CDC42-202ENST00000344548 CENPVL3A0A0U1RRI6 287 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 KRBOX1C9JBD0 128 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 LY86O95711 162 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 CEACAM3P40198 252 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 MFAP2P55001 183 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 DLK1P80370 383 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 SERF2P84101 59 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 MMDQ15546 238 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 C2orf83Q53S99 150 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 UQCC3Q6UW78 93 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 LCN15Q6UWW0 184 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 FNDC4Q9H6D8 234 aaPredicted RBP10.83□□□□□ -0.68
CDC42-202ENST00000344548 LSM4Q9Y4Z0 139 aaKnown RBP10.83□□□□□ -0.68
CDC42-202ENST00000344548 SOX21Q9Y651 276 aaPredicted RBP10.83□□□□□ -0.68
CDC42-202ENST00000344548 NAV2Q8IVL1 2488 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 NDUFS8O00217 210 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 APOC3P02656 99 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 UBE2E1P51965 193 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 PAX8Q06710 450 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 FFAR4Q5NUL3 377 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 MRPL36Q9P0J6 103 aaKnown RBP10.83□□□□□ -0.68
CDC42-202ENST00000344548 TIMM9Q9Y5J7 89 aa10.83□□□□□ -0.68
CDC42-202ENST00000344548 TEX22C9J3V5 150 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 YIF1AO95070 293 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 COMPP49747 757 aaPredicted RBP10.82□□□□□ -0.68
CDC42-202ENST00000344548 HES1Q14469 280 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 GUK1Q16774 197 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 MIC13Q5XKP0 118 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 MMD2Q8IY49 270 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 OR2T6Q8NHC8 308 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 GGTLC1Q9BX51 225 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 DMRT1Q9Y5R6 373 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 GAMTQ14353 236 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 TMEM41BQ5BJD5 291 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 FAM103A1Q9BTL3 118 aaKnown RBP10.82□□□□□ -0.68
CDC42-202ENST00000344548 GGACTQ9BVM4 153 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 SLC25A22Q9H936 323 aa10.82□□□□□ -0.68
CDC42-202ENST00000344548 ZNF469Q96JG9 3925 aaPredicted RBP10.82□□□□□ -0.68
CDC42-202ENST00000344548 NUDT19A8MXV4 375 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 MOSP00540 346 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 RPL27AP46776 148 aaKnown RBP10.81□□□□□ -0.68
CDC42-202ENST00000344548 ERHP84090 104 aaKnown RBP10.81□□□□□ -0.68
CDC42-202ENST00000344548 HAGHQ16775 308 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 CLEC12BQ2HXU8 276 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 CCDC28AQ8IWP9 274 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 NPVFQ9HCQ7 196 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 A0A096LNT2 108 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 NBR2O15453 112 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 FBP1P09467 338 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 PAX1P15863 534 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 GATA2P23769 480 aaPredicted RBP10.81□□□□□ -0.68
CDC42-202ENST00000344548 MINOS1Q5TGZ0 78 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 BRD3OSQ6XYD6 125 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 OR10G4Q8NGN3 311 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 OR10G7Q8NGN6 311 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 SRSF12Q8WXF0 261 aaKnown RBP10.81□□□□□ -0.68
CDC42-202ENST00000344548 EIF5A2Q9GZV4 153 aaKnown RBP10.81□□□□□ -0.68
CDC42-202ENST00000344548 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 MINOS1-NBL1R4GNA1 71 aa10.81□□□□□ -0.68
CDC42-202ENST00000344548 CSPG4Q6UVK1 2322 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 A0A1W2PN81 502 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 ACTL6BO94805 426 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 NDUFA3O95167 84 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 AVPP01185 164 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 SFTA3P0C7M3 94 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 CHRNA7P36544 502 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 CD69Q07108 199 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 PLGLAQ15195 96 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 Q8N6K4 173 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 NPBQ8NG41 125 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 MBD3L1Q8WWY6 194 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 RNF5Q99942 180 aa10.8□□□□□ -0.68
CDC42-202ENST00000344548 IGHV3-21A0A0B4J1V1 117 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 IGHV4-38-2P0DP08 117 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 PPT1P50897 306 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 FAM122CQ6P4D5 195 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 DPPA3Q6W0C5 159 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 ZNF709Q8N972 641 aa10.79□□□□□ -0.68
CDC42-202ENST00000344548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.683e-7■■■□□ 16.3
CDC42-202ENST00000344548 NPFFO15130 113 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms