RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 COPZ2Q9P299 210 aa12.23□□□□□ -0.45
ATG4B-201ENST00000344376 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
ATG4B-201ENST00000344376 MFSD2BA6NFX1 497 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 LGALS9O00182 355 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 ATG12O94817 140 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 HLA-AP01891 365 aaKnown RBP12.22□□□□□ -0.45
ATG4B-201ENST00000344376 IL7P13232 177 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 PI3P19957 117 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 GPHB5Q86YW7 130 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 TMEM14BQ9NUH8 114 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 SORL1Q92673 2214 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 DISC1C4P0D8 188 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 CTDSPLO15194 276 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 ATP6V1G1O75348 118 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 CLEC3BP05452 202 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 ASAH1Q13510 395 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 OR4D10Q8NGI6 311 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 VN1R17PQ8TDU5 208 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 F11RQ9Y624 299 aaKnown RBP12.22□□□□□ -0.45
ATG4B-201ENST00000344376 U3KQK5 164 aa12.22□□□□□ -0.45
ATG4B-201ENST00000344376 ZNF320A2RRD8 509 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 IGKV1-39P01597 117 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 IGKV1D-39P04432 117 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 GPR183P32249 361 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 AKR1C2P52895 323 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.46
ATG4B-201ENST00000344376 C14orf166Q9Y224 244 aaKnown RBP12.21□□□□□ -0.46
ATG4B-201ENST00000344376 COL7A1Q02388 2944 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 C3orf85A0A1B0GTC6 90 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 C2orf70A6NJV1 201 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 B3GALNT1O75752 331 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-201ENST00000344376 AKAIN1P0CW23 69 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 FOLR2P14207 255 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 PLET1Q6UQ28 207 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 WWC2-AS2Q96NR7 200 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 TECRQ9NZ01 308 aaKnown RBP12.2□□□□□ -0.46
ATG4B-201ENST00000344376 TBC1D24Q9ULP9 559 aa12.2□□□□□ -0.46
ATG4B-201ENST00000344376 DNAH9Q9NYC9 4486 aa12.19□□□□□ -0.46
ATG4B-201ENST00000344376 BAK1Q16611 211 aa12.19□□□□□ -0.46
ATG4B-201ENST00000344376 PYDC2Q56P42 97 aa12.19□□□□□ -0.46
ATG4B-201ENST00000344376 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
ATG4B-201ENST00000344376 DBX1A6NMT0 343 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 A8MWP6 167 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 IGHV4-30-4P0DP06 118 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 SURF2Q15527 256 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 CD300EQ496F6 205 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 FAAP20Q6NZ36 180 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 Q8N1Y9 231 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 OR1P1Q8NH06 330 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 ATP6V0BQ99437 205 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 PRRT1Q99946 306 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 PLEKHA3Q9HB20 300 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 ZC4H2Q9NQZ6 224 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 TGOLN2O43493 480 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 GSTZ1O43708 216 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 HSPE1P61604 102 aaKnown RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 DEFB114Q30KQ6 69 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 SPSB3Q6PJ21 355 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 ADAMTSL5Q6ZMM2 481 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 OR4C16Q8NGL9 310 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 CHAC2Q8WUX2 184 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 RRNAD1Q96FB5 475 aaKnown RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 BSCL2Q96G97 398 aaPredicted RBP12.18□□□□□ -0.46
ATG4B-201ENST00000344376 PDCD10Q9BUL8 212 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 UFC1Q9Y3C8 167 aa12.18□□□□□ -0.46
ATG4B-201ENST00000344376 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-201ENST00000344376 IZUMO1RA6ND01 250 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 A8MZ25 164 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 CBLN1P23435 193 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 MFAP2P55001 183 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
ATG4B-201ENST00000344376 SP6Q3SY56 376 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 ZMAT4Q9H898 229 aa12.17□□□□□ -0.46
ATG4B-201ENST00000344376 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
ATG4B-201ENST00000344376 TMEM213A2RRL7 107 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 OR2T8A6NH00 312 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 IGKV1-5P01602 117 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 UCP1P25874 307 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 Q56UQ5 140 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 SLC35G3Q8N808 338 aa12.16□□□□□ -0.46
ATG4B-201ENST00000344376 UBAC2Q8NBM4 344 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms