RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 FOXI2Q6ZQN5 318 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 OR4X2Q8NGF9 303 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 PIGCQ92535 297 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 TAAR6Q96RI8 345 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 CHRNA10Q9GZZ6 450 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 CLCF1Q9UBD9 225 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 ZNF257Q9Y2Q1 563 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 C2orf16Q68DN1 1984 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 A0A087X0K7 114 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 hDV102S1A0JD36 115 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 NPIPA3F8WFD2 350 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 H3BUT2 72 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 K7EQM0 130 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 SYNGR3O43761 229 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 SPTA1P02549 2419 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 BCL3P20749 454 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 PCBD1P61457 104 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 PPP1CAP62136 330 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 PARM1Q6UWI2 310 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 PQLC2Q6ZP29 291 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 SHISA6Q6ZSJ9 500 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 ZNF843Q8N446 348 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 Q8N7P7 452 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 WFDC12Q8WWY7 111 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 H1FXQ92522 213 aaKnown RBP6.76□□□□□ -1.33
ATG4A-201ENST00000343524 ATG2BQ96BY7 2078 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 GTSF1LQ9H1H1 148 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 ARRDC1-AS1Q9H2J1 176 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 SERTAD4Q9NUC0 356 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 OBP2AQ9NY56 170 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 KLRF1Q9NZS2 232 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 PPP1R3CQ9UQK1 317 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 A0A1W2PR80 420 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 FAM90A9PA6NNJ1 464 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 SPINK4O60575 86 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 ZG16O60844 167 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 GOSR1O95249 250 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 FABP6P51161 128 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 CRYBA4P53673 196 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 TCL1AP56279 114 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 TMPRSS3P57727 454 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
ATG4A-201ENST00000343524 DAZAP2Q15038 168 aaPredicted RBP6.75□□□□□ -1.33
ATG4A-201ENST00000343524 PDCD1Q15116 288 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 KRTAP27-1Q3LI81 207 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 PSMG4Q5JS54 123 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 TIMM23BQ5SRD1 257 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 FAM120AOSQ5T036 256 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 NHLRC2Q8NBF2 726 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 RNF138Q8WVD3 245 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 DUSP23Q9BVJ7 150 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 FGF21Q9NSA1 209 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 SIGLEC8Q9NYZ4 499 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 TECRQ9NZ01 308 aaKnown RBP6.75□□□□□ -1.33
ATG4A-201ENST00000343524 IL36RNQ9UBH0 155 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 ZNF835Q9Y2P0 537 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 PTPN13Q12923 2485 aa6.75□□□□□ -1.33
ATG4A-201ENST00000343524 LRP4O75096 1905 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 IGLV2-14P01704 120 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 ADH4P08319 380 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 FRMD6-AS1P0C7T7 363 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 CT45A6P0DMU7 189 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 CT45A5P0DMU8 189 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 CT45A7P0DMV0 189 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 MGST1P10620 155 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 COL8A1P27658 744 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 PPOXP50336 477 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 KIR3DS1Q14943 382 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 C2orf27AQ580R0 203 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 CT45A1Q5HYN5 189 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 COLCA1Q6ZS62 124 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 Q6ZSR6 202 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 H2BFWTQ7Z2G1 175 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 DTX1Q86Y01 620 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 DOLPP1Q86YN1 238 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 STXBP6Q8NFX7 210 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 OR11H1Q8NG94 326 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 OR2Z1Q8NG97 314 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 OR11H2Q8NH07 326 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 CT45A3Q8NHU0 189 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 JMJD8Q96S16 334 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 GGTLC1Q9BX51 225 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 LINC00470Q9BZP3 86 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 RNASE7Q9H1E1 156 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 WDR54Q9H977 334 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 SH2D2AQ9NP31 389 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 TRAPPC2LQ9UL33 140 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 PIEZO2Q9H5I5 2752 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 C21orf140B9A014 251 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 RBMXL2O75526 392 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 NEURL1O76050 574 aa6.74□□□□□ -1.33
ATG4A-201ENST00000343524 FBLP22087 321 aaKnown RBP6.74□□□□□ -1.33
ATG4A-201ENST00000343524 MFAP2P55001 183 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms