RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SH3BGRL2Q9UJC5 107 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 RNF115Q9Y4L5 304 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 HS3ST3B1Q9Y662 390 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 PPIAL4EA0A075B759 164 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 PPIAL4DF5H284 164 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TIAF1O95411 115 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 MT-CO3P00414 261 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 PPIAL4FP0DN26 164 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 CSRP1P21291 193 aaKnown RBP4.02□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM42Q69YG0 159 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 PPIAL4AQ9Y536 164 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 CHD3Q12873 2000 aaKnown RBP4.02□□□□□ -1.77
CSMD3-203ENST00000343508 MORN2Q502X0 79 aa4.02□□□□□ -1.77
CSMD3-203ENST00000343508 LINC01559Q495D7 138 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 WFDC8Q8IUA0 241 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 GPR82Q96P67 336 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 APOHP02749 345 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 IL4P05112 153 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 FOXA3P55318 350 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 IL15RAQ13261 267 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ORMDL3Q8N138 153 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 OR4X2Q8NGF9 303 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM186Q96B77 213 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF414Q96IQ9 312 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 NCOR1P1Q9H4R4 102 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 IGHV3OR15-7A0A075B7D8 119 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 WDR83OSQ9Y284 106 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 PGPEP1LA6NFU8 196 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 RRHO14718 337 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 DLX1P56177 255 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 TSKUQ8WUA8 353 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 RPP21Q9H633 154 aaKnown RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 IQCF6A8MYZ5 107 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 RAB9AP51151 201 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF837Q96EG3 531 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 SPEM2Q0P670 501 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF826PQ6ZT77 177 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 MGST2Q99735 147 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 SEPSECSQ9HD40 501 aaKnown RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ERVK11-1P61568 191 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 YLPM1P49750 1951 aaKnown RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 PDLIM4P50479 330 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 RSPO4Q2I0M5 234 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 PFN1P07737 140 aaKnown RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 MIR17HGQ75NE6 70 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 DUTP33316 252 aaKnown RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 RPL27AP46776 148 aaKnown RBP4.01□□□□□ -1.77
CSMD3-203ENST00000343508 AMMECR1LQ6DCA0 310 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ARRDC1-AS1Q9H2J1 176 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF257Q9Y2Q1 563 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 SPCS1Q9Y6A9 102 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 C2orf16Q68DN1 1984 aa4.01□□□□□ -1.77
CSMD3-203ENST00000343508 PRR33A8MZF0 331 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 NPIPB11E5RHQ5 1161 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 CELA2AP08217 269 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 FNDC4Q9H6D8 234 aaPredicted RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 A0A1W2PS18 150 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 CA1P00915 261 aaPredicted RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 IGKV1-12A0A0C4DH73 117 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 EREGO14944 169 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 IGKV1D-12P01611 117 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 TMEM78Q5T7P6 136 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 IMMP1LQ96LU5 166 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 CIARTQ8N365 385 aaPredicted RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 MEGF9Q9H1U4 602 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 ATP5LO75964 103 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 COX6CP09669 75 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 FOXL2P58012 376 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 DEPPQ9NTK1 212 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 RFNGQ9Y644 331 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 C1orf162Q8NEQ5 155 aaPredicted RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 NPIPB3Q92617 1050 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 FOXA2Q9Y261 457 aaPredicted RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 NCKAP5O14513 1909 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 GON4LQ3T8J9 2241 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 TCRBV4S1A1TA0A5B7 111 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 AHRRA9YTQ3 701 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 H3BUT2 72 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 HSD52Q0P140 79 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 OR9G4Q8NGQ1 327 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 OR1N2Q8NGR9 330 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 SAP25Q8TEE9 199 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 C1orf147Q96MC9 270 aaPredicted RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 C1RLQ9NZP8 487 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 ZNF716A6NP11 495 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 RPL39P5Q59GN2 51 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 FOXL2NBQ6ZUU3 175 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 GOLT1AQ6ZVE7 132 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 C1orf210Q8IVY1 113 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 MRPL16Q9NX20 251 aaKnown RBP4□□□□□ -1.77
CSMD3-203ENST00000343508 EPDR1Q9UM22 224 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 A0A1W2PR77 199 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 M0R3E3 92 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 MMP23AO75900 390 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 HBDP02042 147 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 REG1BP48304 166 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 PRELID3AQ96N28 172 aa4□□□□□ -1.77
CSMD3-203ENST00000343508 RAB1BQ9H0U4 201 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms