RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 IGHV1-69-2A0A0G2JMI3 117 aa6□□□□□ -1.45
VCAN-202ENST00000342785 NTF4P34130 210 aa6□□□□□ -1.45
VCAN-202ENST00000342785 ECSCRQ19T08 205 aa6□□□□□ -1.45
VCAN-202ENST00000342785 OR4B1Q8NGF8 309 aa6□□□□□ -1.45
VCAN-202ENST00000342785 MRPL20Q9BYC9 149 aaKnown RBP6□□□□□ -1.45
VCAN-202ENST00000342785 RNF115Q9Y4L5 304 aa6□□□□□ -1.45
VCAN-202ENST00000342785 GPX4P36969 197 aaPredicted RBP5.99□□□□□ -1.45
VCAN-202ENST00000342785 MRPL37Q9BZE1 423 aaKnown RBP5.99□□□□□ -1.45
VCAN-202ENST00000342785 RALYQ9UKM9 306 aaKnown RBP5.99□□□□□ -1.45
VCAN-202ENST00000342785 THADAQ6YHU6 1953 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 IGHV1-18A0A0C4DH31 117 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 TM4SF5O14894 197 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 OR4A5Q8NH83 315 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 A0A1B0GW64 132 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 C17orf100A8MU93 164 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 NBEAP1P0C6P0 100 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 CD99P14209 185 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 MAS1LP35410 378 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 COMPP49747 757 aaPredicted RBP5.99□□□□□ -1.45
VCAN-202ENST00000342785 CACNG8Q8WXS5 425 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 CLEC7AQ9BXN2 247 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 MAP1LC3CQ9BXW4 147 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 MEF2CQ06413 473 aaPredicted RBP5.99□□□□□ -1.45
VCAN-202ENST00000342785 Q6P435 159 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 MDS2Q8NDY4 140 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 PRR7Q8TB68 274 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 GRAMD2BQ96HH9 432 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 CLEC5AQ9NY25 188 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 LINC00312Q9Y6C7 94 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 SAA1P0DJI8 122 aaPredicted RBP5.99□□□□□ -1.45
VCAN-202ENST00000342785 PNKDQ8N490 385 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 ABHD17AQ96GS6 310 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 METRNQ9UJH8 293 aa5.99□□□□□ -1.45
VCAN-202ENST00000342785 UPK2O00526 184 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 FCGR2BP31994 310 aaPredicted RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 FOXA3P55318 350 aaPredicted RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 RNFT1Q5M7Z0 435 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 TREML4Q6UXN2 200 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 C19orf35Q6ZS72 473 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 REC114Q7Z4M0 266 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 MUC15Q8N387 334 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 UFC1Q9Y3C8 167 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 PIEZO1Q92508 2521 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 IGKV3-7A0A075B6H7 116 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 C15orf61A6NNL5 157 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 M0QZ24 198 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 IL15RAQ13261 267 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 COL5A1-AS1Q5SY13 56 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 SPSB3Q6PJ21 355 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 GTF3C1Q12789 2109 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 SMIM17P0DL12 118 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 RELBQ01201 579 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 GFI1BQ5VTD9 330 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 COQ2Q96H96 371 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 FBXL15Q9H469 300 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 B9A039 149 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 RPLP1P05386 114 aaKnown RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 HOXA4Q00056 320 aaPredicted RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 ZNF585BQ52M93 769 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 GOLT1AQ6ZVE7 132 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 LINC00305Q7Z4B0 112 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 FAM57AQ8TBR7 257 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 IGHV3-35A0A0C4DH35 117 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 LEPROTL1O95214 131 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 GOSR1O95249 250 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 AMY1AP04745 511 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 LINC00205P59089 165 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 BSPH1Q075Z2 132 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 LBHQ53QV2 105 aaPredicted RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 LYPD6Q86Y78 171 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 OCC1Q8TAD7 63 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 LINC01560Q8TB33 94 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 SRSF12Q8WXF0 261 aaKnown RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 PGLYRP4Q96LB8 373 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 TMEM242Q9NWH2 141 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 TRBV9A0A0B4J1U6 114 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 UCNP55089 124 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 ELOVL5Q9NYP7 299 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 RPUSD1Q9UJJ7 312 aaKnown RBP5.98□□□□□ -1.45
VCAN-202ENST00000342785 CBY1Q9Y3M2 126 aa5.98□□□□□ -1.45
VCAN-202ENST00000342785 CSPG4Q6UVK1 2322 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 MYO18BQ8IUG5 2567 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 A0A1B0GV90 55 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 OR8A1Q8NGG7 326 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 TMEM170AQ8WVE7 144 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 GUCD1Q96NT3 240 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 PLSCR4Q9NRQ2 329 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 LINC00473A8K010 186 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 F5H697 171 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 MLNRO43193 412 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 STAG3L2P0CL84 134 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 STAG3L3P0CL85 134 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 PMCHL1Q16048 86 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 ZNF788Q6ZQV5 615 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 SLX1AQ9BQ83 275 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 EFNB3Q15768 340 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 HIST1H2BLQ99880 126 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 UBTD1Q9HAC8 227 aa5.97□□□□□ -1.45
VCAN-202ENST00000342785 PLXNA2O75051 1894 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms