RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 OR51G1Q8NGK1 321 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 SNRNP40Q96DI7 357 aaKnown RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 LAT2Q9GZY6 243 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 A0A0G2JLL6 359 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 APCSP02743 223 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 OR10A2Q9H208 303 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 HS3ST3A1Q9Y663 406 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 RBP4P02753 201 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 SMIM10L1P0DMW3 83 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 S100A7L2Q5SY68 101 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 SMIM10Q96HG1 83 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 TIAF1O95411 115 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 KIR2DL1P43626 348 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 ARHGAP5-AS1Q96IT6 56 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM147Q9BVK8 224 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 VSIRQ9H7M9 311 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CLDN14O95500 239 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 ORM2P19652 201 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 GAGE2AQ6NT46 116 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 OR4X2Q8NGF9 303 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 GRAMD2BQ96HH9 432 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CLN8Q9UBY8 286 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CCDC168Q8NDH2 2452 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM272A0A1B0GTI8 110 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 hDV102S1A0JD36 115 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 GAGE12BA1L429 117 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 PSG1P11464 419 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 Q6ZS52 159 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 SHISA3A0PJX4 238 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 B5MCH6 92 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 UBE2ZQ9H832 354 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 UBE2G1P62253 170 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 PIFOQ8TCI5 191 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CHCHD1Q96BP2 118 aaKnown RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CST9LQ9H4G1 147 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 OSTCQ9NRP0 149 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 IGHV3-73A0A0B4J1V6 119 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 A0A1W2PQM1 296 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 C9JCJ5 164 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 AZU1P20160 251 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 LRRC10Q5BKY1 277 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF774Q6NX45 483 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 AMELYQ99218 206 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 NPIPB11E5RHQ5 1161 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 KLRC4-KLRK1H3BQV0 150 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 NPIPB7O75200 414 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 NKX2-2O95096 273 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF83P51522 516 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 C11orf44Q8N8P7 122 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 NEUROG1Q92886 237 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 USP17L23D6RBM5 183 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 RER1O15258 196 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 LRCOL1A6NCL2 159 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 Q71RC1 249 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 HIST1H2BLQ99880 126 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CD164L2Q6UWJ8 174 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 H1FNTQ75WM6 255 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 KCNS1Q96KK3 526 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CCL28Q9NRJ3 127 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 HERV-K104P63124 156 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF703Q9H7S9 590 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 SPRY3O43610 288 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CD5LO43866 347 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 DHRS3O75911 302 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 CELA2AP08217 269 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 EVI2AP22794 236 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 MRPL2Q5T653 305 aaKnown RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 GCN1Q92616 2671 aaKnown RBP3.02□□□□□ -1.93
SYNE1-201ENST00000341594 PKD1L2Q7Z442 2459 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 HS3ST6Q96QI5 342 aa3.02□□□□□ -1.93
SYNE1-201ENST00000341594 LPAR2Q9HBW0 351 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 LMO1P25800 156 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 BTCP35070 178 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM45BQ96B21 275 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM56Q96MV1 263 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM56-RWDD3S4R434 201 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 KIR2DL5BA0A0G2JN68 375 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 KIR2DL5BA0A0G2JPC4 375 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 NDUFA3O95167 84 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 NBEAP1P0C6P0 100 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 KIR2DL5AQ8N109 375 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 IGHMP01871 453 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 C4orf45Q96LM5 186 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 NDFIP1Q9BT67 221 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 TCTEX1D4Q5JR98 221 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 MEIG1Q5JSS6 88 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF826PQ6ZT77 177 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 LHFPL1Q86WI0 220 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 RBPJQ06330 500 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 DHHO43323 396 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 HSD52Q0P140 79 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 ZCCHC24Q8N2G6 241 aaKnown RBP3.01□□□□□ -1.93
SYNE1-201ENST00000341594 SAP30LQ9HAJ7 183 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 ANXA10Q9UJ72 324 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 SH2D1BO14796 132 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 PAPPA-AS1Q5QFB9 102 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 Q6ZSR3 168 aa3.01□□□□□ -1.93
SYNE1-201ENST00000341594 MBD3L2Q8NHZ7 208 aaPredicted RBP3.01□□□□□ -1.93
SYNE1-201ENST00000341594 LINC00479Q96M42 142 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms