RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 K7EP13 123 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 RAB27BO00194 218 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 KBTBD11O94819 623 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 FABP3P05413 133 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 AZU1P20160 251 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 ZBTB25P24278 435 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 HOXA1P49639 335 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-201ENST00000340660 TOMM20LQ6UXN7 152 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 PARP16Q8N5Y8 322 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 Q8N9P0 234 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-201ENST00000340660 PYURFQ96I23 114 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 ARL8BQ9NVJ2 186 aa7.13□□□□□ -1.27
ATXN3-201ENST00000340660 EXOGQ9Y2C4 368 aaKnown RBP7.13□□□□□ -1.27
ATXN3-201ENST00000340660 K7EIM0 57 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 CCNKO75909 580 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 CST1P01037 141 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 HMGN1P05114 100 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 GLAP06280 429 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 MALP21145 153 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 DHRS2Q13268 280 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 WFDC10BQ8IUB3 73 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 TMEM167AQ8TBQ9 72 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 GINS3Q9BRX5 216 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 OR2D2Q9H210 308 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 TVP23BQ9NYZ1 205 aa7.12□□□□□ -1.27
ATXN3-201ENST00000340660 F5H697 171 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 LECT2O14960 151 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 CRYGDP07320 174 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 RAB3AP20336 220 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 EVI2AP22794 236 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 CRHBPP24387 322 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 TSPOP30536 169 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 CDK5Q00535 292 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 TPBGQ13641 420 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 ARFRP1Q13795 201 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 TP53I3Q53FA7 332 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 ZNF880Q6PDB4 577 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 TMEM208Q9BTX3 173 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 NXF2Q9GZY0 626 aaKnown RBP7.11□□□□□ -1.27
ATXN3-201ENST00000340660 PAK1IP1Q9NWT1 392 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-201ENST00000340660 GID8Q9NWU2 228 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 GNG8Q9UK08 70 aa7.11□□□□□ -1.27
ATXN3-201ENST00000340660 FAM90A26D6RGX4 464 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 ZNF780AO75290 641 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-201ENST00000340660 P2RY1P47900 373 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 TMEM236Q5W0B7 351 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 GLYATQ6IB77 296 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 PUSL1Q8N0Z8 303 aaKnown RBP7.1□□□□□ -1.27
ATXN3-201ENST00000340660 TMEM37Q8WXS4 190 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 MCUR1Q96AQ8 359 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 TMEM231Q9H6L2 316 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 RDH8Q9NYR8 311 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 CLEC2DQ9UHP7 191 aa7.1□□□□□ -1.27
ATXN3-201ENST00000340660 IGKV1-6A0A0C4DH72 117 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 BBIP1A8MTZ0 92 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 TRIAP1O43715 76 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 DUTP33316 252 aaKnown RBP7.09□□□□□ -1.27
ATXN3-201ENST00000340660 PAX9P55771 341 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 SLC25A24Q6NUK1 477 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 GDPD1Q8N9F7 314 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 OR10J6PQ8NGY7 276 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 SLC25A46Q96AG3 418 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 S100A13Q99584 98 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 BANF2Q9H503 90 aa7.09□□□□□ -1.27
ATXN3-201ENST00000340660 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 OR4C45A6NMZ5 311 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 RGS16O15492 202 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-201ENST00000340660 PDCD6O75340 191 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
ATXN3-201ENST00000340660 SUMO4Q6EEV6 95 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 WDR73Q6P4I2 378 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 SETD6Q8TBK2 473 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 DCUN1D5Q9BTE7 237 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 TAS2R4Q9NYW5 299 aa7.08□□□□□ -1.28
ATXN3-201ENST00000340660 J3QRK9 145 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 ELK1P19419 428 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 ZNF93P35789 620 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-201ENST00000340660 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-201ENST00000340660 SNRPD3P62318 126 aaKnown RBP7.07□□□□□ -1.28
ATXN3-201ENST00000340660 RPL8P62917 257 aaKnown RBP7.07□□□□□ -1.28
ATXN3-201ENST00000340660 MRPS15P82914 257 aaKnown RBP7.07□□□□□ -1.28
ATXN3-201ENST00000340660 PSG9Q00887 426 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 UNC119Q13432 240 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 RCN1Q15293 331 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 IGSF11Q5DX21 431 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 LYPD5Q6UWN5 251 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 ARPINQ7Z6K5 226 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 LINC00612Q8N6U2 182 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 OR10W1Q8NGF6 305 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 TMEM109Q9BVC6 243 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 HINT2Q9BX68 163 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 SELENOIQ9C0D9 397 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 SAV1Q9H4B6 383 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-201ENST00000340660 Q9HAA7 133 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 ZNF556Q9HAH1 456 aa7.07□□□□□ -1.28
ATXN3-201ENST00000340660 RBFOX3A6NFN3 312 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 FCGR3BO75015 233 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 HLA-GP17693 338 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 NKX2-1P43699 371 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms