RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 LFNGQ8NES3 379 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 TAF15Q92804 592 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSRP1-201ENST00000340006 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 RBKSQ9H477 322 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 PLEKHA3Q9HB20 300 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
CSRP1-201ENST00000340006 WSB1Q9Y6I7 421 aa11.66□□□□□ -0.54
CSRP1-201ENST00000340006 A0A0D9SG52 128 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 TMEM50AO95807 157 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 C4BPBP20851 252 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 RPL12P30050 165 aaKnown RBP11.65□□□□□ -0.54
CSRP1-201ENST00000340006 P2RY1P47900 373 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 VAMP2P63027 116 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 ERHP84090 104 aaKnown RBP11.65□□□□□ -0.54
CSRP1-201ENST00000340006 AARDQ4LEZ3 155 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 GON7Q9BXV9 100 aa11.65□□□□□ -0.54
CSRP1-201ENST00000340006 ATP6V0E1O15342 81 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 OR13C7P0DN81 318 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 HKR1P10072 659 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 CAV2P51636 162 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 SSBP2P81877 361 aaPredicted RBP11.65□□□□□ -0.55
CSRP1-201ENST00000340006 PRCDQ00LT1 54 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 OPCMLQ14982 345 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 MRPL41Q8IXM3 137 aaKnown RBP11.65□□□□□ -0.55
CSRP1-201ENST00000340006 RAB40CQ96S21 281 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 SLA2Q9H6Q3 261 aa11.65□□□□□ -0.55
CSRP1-201ENST00000340006 A0A1W2PN81 502 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 REG1AP05451 166 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 IAPPP10997 89 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 CHRNA7P36544 502 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 SNCAP37840 140 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 RPL15P61313 204 aaKnown RBP11.64□□□□□ -0.55
CSRP1-201ENST00000340006 NDPQ00604 133 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 UNQ5815/PRO19632Q6UWF5 114 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 OR5T1Q8NG75 326 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 OR2T6Q8NHC8 308 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 SGMS2Q8NHU3 365 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 NOL4LQ96MY1 436 aaPredicted RBP11.64□□□□□ -0.55
CSRP1-201ENST00000340006 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
CSRP1-201ENST00000340006 LYRM2Q9NU23 88 aaPredicted RBP11.64□□□□□ -0.55
CSRP1-201ENST00000340006 SETD2Q9BYW2 2564 aaPredicted RBP11.64□□□□□ -0.55
CSRP1-201ENST00000340006 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 AP4M1O00189 453 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 EGR2P11161 476 aaPredicted RBP11.63□□□□□ -0.55
CSRP1-201ENST00000340006 PAX9P55771 341 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 ZNF702PQ9H963 129 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 FBXO7Q9Y3I1 522 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 JMJD1CQ15652 2540 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 A0A1B0GW64 132 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 FAM24AA6NFZ4 105 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 G3V318 75 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 H3BP45 60 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 DEFA4P12838 97 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 VDAC2P45880 294 aaPredicted RBP11.63□□□□□ -0.55
CSRP1-201ENST00000340006 RPL23AP62750 156 aaKnown RBP11.63□□□□□ -0.55
CSRP1-201ENST00000340006 Q6ZSV7 163 aa11.63□□□□□ -0.55
CSRP1-201ENST00000340006 TRAV41A0A0B4J266 112 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 KANTRA0A1W2PQU2 76 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 TSPAN9O75954 239 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 IFNA10P01566 189 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 TMEM95Q3KNT9 176 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 PDLIM3Q53GG5 364 aaPredicted RBP11.62□□□□□ -0.55
CSRP1-201ENST00000340006 AKIRIN2Q53H80 203 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 HSD17B13Q7Z5P4 300 aaPredicted RBP11.62□□□□□ -0.55
CSRP1-201ENST00000340006 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
CSRP1-201ENST00000340006 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 PSENENQ9NZ42 101 aa11.62□□□□□ -0.55
CSRP1-201ENST00000340006 BCL2L11O43521 198 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 IGF1P05019 195 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 AREGP15514 252 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 TAS2R30P59541 319 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
CSRP1-201ENST00000340006 TMEM252Q8N6L7 170 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 SMIM8Q96KF7 97 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 IGSF23A1L1A6 192 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 RPP30P78346 268 aaKnown RBP11.61□□□□□ -0.55
CSRP1-201ENST00000340006 EWSR1Q01844 656 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSRP1-201ENST00000340006 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 STPG2Q8N412 459 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 TMEM68Q96MH6 324 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 SRSF8Q9BRL6 282 aaKnown RBP11.61□□□□□ -0.55
CSRP1-201ENST00000340006 SLC25A31Q9H0C2 315 aa11.61□□□□□ -0.55
CSRP1-201ENST00000340006 IGLC7A0M8Q6 106 aa11.6□□□□□ -0.55
CSRP1-201ENST00000340006 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
CSRP1-201ENST00000340006 NHLH2Q02577 135 aa11.6□□□□□ -0.55
CSRP1-201ENST00000340006 WNT10AQ9GZT5 417 aa11.6□□□□□ -0.55
CSRP1-201ENST00000340006 U3KQ87 197 aa11.6□□□□□ -0.55
CSRP1-201ENST00000340006 LY86O95711 162 aa11.59□□□□□ -0.55
CSRP1-201ENST00000340006 HTR2BP41595 481 aa11.59□□□□□ -0.55
CSRP1-201ENST00000340006 ASPHD1Q5U4P2 390 aa11.59□□□□□ -0.55
CSRP1-201ENST00000340006 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
CSRP1-201ENST00000340006 Q8N2B8 174 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms