RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 JOSD1Q15040 202 aaPredicted RBP9.92□□□□□ -0.82
USP1-201ENST00000339950 MUC21Q5SSG8 566 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 STPG3Q8N7X2 389 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 OR1B1Q8NGR6 318 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 LSM10Q969L4 123 aaKnown RBP9.92□□□□□ -0.82
USP1-201ENST00000339950 COL12A1Q99715 3063 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 TACC2O95359 2948 aa9.92□□□□□ -0.82
USP1-201ENST00000339950 KRTCAP3Q53RY4 240 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 OR9G1Q8NH87 305 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 SLC35E1Q96K37 410 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 SSUH2Q9Y2M2 353 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 COX7A2P2O60397 106 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 NUTF2P61970 127 aaKnown RBP9.91□□□□□ -0.82
USP1-201ENST00000339950 FOXC1Q12948 553 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 DAZAP2Q15038 168 aaPredicted RBP9.91□□□□□ -0.82
USP1-201ENST00000339950 MMDQ15546 238 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
USP1-201ENST00000339950 OR4S2Q8NH73 311 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 OR2T6Q8NHC8 308 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 FLYWCH2Q96CP2 140 aaKnown RBP9.91□□□□□ -0.82
USP1-201ENST00000339950 TMSB15BA0A087X1C1 80 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 SLC25A17O43808 307 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 GZMBP10144 247 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 TEPPQ6URK8 271 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 TCTEX1D1Q8N7M0 179 aa9.91□□□□□ -0.82
USP1-201ENST00000339950 IGHV1-18A0A0C4DH31 117 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 PPIHO43447 177 aaKnown RBP9.9□□□□□ -0.82
USP1-201ENST00000339950 SNAI2O43623 268 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 COX5BP10606 129 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 IL3RAP26951 378 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 RPL24P83731 157 aaKnown RBP9.9□□□□□ -0.82
USP1-201ENST00000339950 RTL8BQ17RB0 113 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 NCKAP5O14513 1909 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 HELTA6NFD8 242 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 M0QZK8 103 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 GGCTO75223 188 aaKnown RBP9.9□□□□□ -0.82
USP1-201ENST00000339950 RHOBP62745 196 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 ZZEF1O43149 2961 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 A0A087WWC5 75 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 M0R2Z0 102 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 MMP23AO75900 390 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 LY6HO94772 140 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 GPR6P46095 362 aaPredicted RBP9.9□□□□□ -0.82
USP1-201ENST00000339950 GFRALQ6UXV0 394 aa9.9□□□□□ -0.82
USP1-201ENST00000339950 PARD6GQ9BYG4 376 aaPredicted RBP9.9□□□□□ -0.82
USP1-201ENST00000339950 GSX1Q9H4S2 264 aaPredicted RBP9.9□□□□□ -0.82
USP1-201ENST00000339950 MGST3O14880 152 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 RBP4P02753 201 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 IGKV1-16P04430 117 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 NPSP0C0P6 89 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 FRMD6-AS1P0C7T7 363 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 ZNF134P52741 427 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 NUBP1P53384 320 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 TNXAQ16473 311 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 OR4A47Q6IF82 309 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 OR2D3Q8NGH3 330 aa9.9□□□□□ -0.83
USP1-201ENST00000339950 MRPL37Q9BZE1 423 aaKnown RBP9.9□□□□□ -0.83
USP1-201ENST00000339950 SAA2-SAA4A0A096LPE2 208 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 PRRG2O14669 202 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 IL6RP08887 468 aaPredicted RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 SAA2P0DJI9 122 aaPredicted RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 USF1P22415 310 aaPredicted RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 FOXA3P55318 350 aaPredicted RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 LGALS4P56470 323 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 CYP2G1PQ6ZSU1 146 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 ZNF355PQ9NSJ1 428 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 RNF7Q9UBF6 113 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 POLQO75417 2590 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 PYYP10082 97 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 UQCRFS1P47985 274 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 UBE2G1P62253 170 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 GCSAMQ8N6F7 178 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 NPIPB3Q92617 1050 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 PRDM13Q9H4Q3 707 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 C10orf142B7Z368 130 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 ERHP84090 104 aaKnown RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 MORN2Q502X0 79 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 ANAPC16Q96DE5 110 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 MRPL18Q9H0U6 180 aaKnown RBP9.89□□□□□ -0.83
USP1-201ENST00000339950 HES4Q9HCC6 221 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
USP1-201ENST00000339950 PRR33A8MZF0 331 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 ATP6V1FQ16864 119 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 TMEM208Q9BTX3 173 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 IGKV1D-17A0A075B6S4 117 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 K7EM74 188 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 SLC25A5P05141 298 aaKnown RBP9.88□□□□□ -0.83
USP1-201ENST00000339950 TIMP3P35625 211 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 MFAP2P55001 183 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 ZNF295-AS1Q8N0V1 137 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 C5orf30Q96GV9 206 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
USP1-201ENST00000339950 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 SLC35E4Q6ICL7 350 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms