RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SSMEM1Q8WWF3 244 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 PLPPR2Q96GM1 343 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 CYSLTR1Q9Y271 337 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 SPTBN5Q9NRC6 3674 aaKnown RBP7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 A0A1W2PRD5 423 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 A0A1W2PRF3 423 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 A0A1W2PRM7 423 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 CRXO43186 299 aaPredicted RBP7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 PLP2Q04941 152 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 IBA57Q5T440 356 aaKnown RBP7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 MIC13Q5XKP0 118 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 PARM1Q6UWI2 310 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 H1FXQ92522 213 aaKnown RBP7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 MAP1LC3CQ9BXW4 147 aa7.99□□□□□ -1.13
PTCHD4-201ENST00000339488 A1L4Q6 167 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 LINC01548A6NM66 108 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 MYF5P13349 255 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 GNG3P63215 75 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 LY6G5CQ5SRR4 150 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 DUSP23Q9BVJ7 150 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 GGTLC1Q9BX51 225 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 GCM1Q9NP62 436 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 NHP2Q9NX24 153 aaKnown RBP7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 SYNGR1O43759 233 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 APOMO95445 188 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 GP1BBP13224 206 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 FXYD7P58549 80 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 MALLQ13021 153 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 ZNF718Q3SXZ3 478 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 ZNF562Q6V9R5 426 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 LINC00479Q96M42 142 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 FRYQ5TBA9 3013 aa7.98□□□□□ -1.13
PTCHD4-201ENST00000339488 A0A0J9YY10 115 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 A0A1B0GX78 115 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 C16orf97H3BN30 126 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 ACTL6BO94805 426 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 FASLGP48023 281 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 PPP1CAP62136 330 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 RNPS1Q15287 305 aaKnown RBP7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 HES3Q5TGS1 186 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 OSR2Q8N2R0 312 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 Q8N7P7 452 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 C8orf46Q8TAG6 207 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 NT5CQ8TCD5 201 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 COX14Q96I36 57 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 LRRC30A6NM36 301 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 P04436 131 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 SFTA2Q6UW10 78 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 GCSAMQ8N6F7 178 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 FGF14Q92915 247 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 RAB1CQ92928 201 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 IRF7Q92985 503 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 PTH2Q96A98 100 aa7.97□□□□□ -1.13
PTCHD4-201ENST00000339488 A4D1N5 150 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 DHRS3O75911 302 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 DAZAP2Q15038 168 aaPredicted RBP7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 PSG5Q15238 335 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 TTC9CQ8N5M4 171 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 TMEM178AQ8NBL3 297 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 PP6455Q8WZ26 134 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 RERGQ96A58 199 aaPredicted RBP7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 TIMM29Q9BSF4 260 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 RAB1BQ9H0U4 201 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 MS4A6AQ9H2W1 248 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 USF3Q68DE3 2245 aa7.96□□□□□ -1.13
PTCHD4-201ENST00000339488 TMEM265A0A087WTH1 108 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 IZUMO1RA6ND01 250 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 G6PCP35575 357 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 CLRN1P58418 232 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 GRB2P62993 217 aaKnown RBP7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 PPP1R32Q7Z5V6 425 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 SFTPA2Q8IWL1 248 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 NUP35Q8NFH5 326 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 OR8A1Q8NGG7 326 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 TMEM54Q969K7 222 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 PRELID3AQ96N28 172 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 ZNF391Q9UJN7 358 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 SEC16AO15027 2179 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 ZIC3O60481 467 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 TUSC2O75896 110 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 SP9P0CG40 484 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 CCL1P22362 96 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 ZNF146Q15072 292 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 NFE4Q86UQ8 179 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 BCL6BQ8N143 479 aaPredicted RBP7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 TM4SF19Q96DZ7 209 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 GRAMD2BQ96HH9 432 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 LYRM4Q9HD34 91 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 KMT2EQ8IZD2 1858 aa7.96□□□□□ -1.14
PTCHD4-201ENST00000339488 MYO7AQ13402 2215 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 SMIM27A0A1W2PRY6 76 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 PMS2P5A8MQ11 134 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 CD27P26842 260 aa7.95□□□□□ -1.14
PTCHD4-201ENST00000339488 GCHFRP30047 84 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms