RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 NDPQ00604 133 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 SLC35E3Q7Z769 313 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 TMEM252Q8N6L7 170 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 ZC4H2Q9NQZ6 224 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 PARP11Q9NR21 331 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 A0A0D9SG52 128 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 TRIM77I1YAP6 450 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 CYB5BO43169 146 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 IGF1P05019 195 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 C4BPBP20851 252 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 RAB11AP62491 216 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 TMEM267Q0VDI3 215 aaPredicted RBP11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 TMEM14EPQ6UXP3 125 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 OR1L6Q8NGR2 347 aa11.48□□□□□ -0.57
NIPAL3-202ENST00000339255 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 NPIPB5A8MRT5 1133 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 AP4M1O00189 453 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 ATP6V0E1O15342 81 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 HKR1P10072 659 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 AREGP15514 252 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 SULT1A1P50225 295 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 HBG1P69891 147 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 HBG2P69892 147 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 EWSR1Q01844 656 aaKnown RBP eCLIP11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 AKIRIN2Q53H80 203 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 C9orf152Q5JTZ5 239 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 STPG2Q8N412 459 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
NIPAL3-202ENST00000339255 IGSF23A1L1A6 192 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 CORTO00230 105 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 TSPAN9O75954 239 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 OR8U8P0C7N1 319 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 BLCAPP62952 87 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 LFNGQ8NES3 379 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 PINX1Q96BK5 328 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 DUX5Q96PT3 197 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 FAM103A1Q9BTL3 118 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 HSPB11Q9Y547 144 aa11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-202ENST00000339255 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 CRYGCP07315 174 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 METTL15P1P0C7V9 234 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 EGR2P11161 476 aaPredicted RBP11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 Q8N2B8 174 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 P2RX4Q99571 388 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 GON7Q9BXV9 100 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 ESM1Q9NQ30 184 aa11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.58
NIPAL3-202ENST00000339255 TEP1Q99973 2627 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 SH2D7A6NKC9 451 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 TAAR5O14804 337 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 CST7O76096 145 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 IFNA4P05014 189 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 DEFA4P12838 97 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 CTRB1P17538 263 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 CXCL2P19875 107 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 AP2S1P53680 142 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 CTRB2Q6GPI1 263 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 UNQ5815/PRO19632Q6UWF5 114 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 OR10P1Q8NGE3 313 aa11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 RNASEH2CQ8TDP1 164 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-202ENST00000339255 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 FBXO24O75426 580 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 REG1AP05451 166 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 APELAP0DMC3 54 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 S100A11P31949 105 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 ECSCRQ19T08 205 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 C19orf54Q5BKX5 351 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 PVRIGQ6DKI7 326 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 ETV3LQ6ZN32 361 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 OR1S2Q8NGQ3 325 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 FAM110DQ8TAY7 271 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 ARL6Q9H0F7 186 aa11.44□□□□□ -0.58
NIPAL3-202ENST00000339255 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 TCF21O43680 179 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 CRYBA1P05813 215 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 NHLH2Q02577 135 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 LAMTOR1Q6IAA8 161 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 OR8G2PQ6IF36 304 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 TMEM217Q8N7C4 229 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 OR5C1Q8NGR4 320 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms