RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 DFFBO76075 338 aa11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RNASE2P10153 161 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 BSXQ3C1V8 233 aa11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 SSMEM1Q8WWF3 244 aa11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 PINX1Q96BK5 328 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 RBM14Q96PK6 669 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-201ENST00000338399 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.54
CDK5RAP3-201ENST00000338399 AREGP15514 252 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 CX3CL1P78423 397 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 C2orf83Q53S99 150 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 HSD17B11Q8NBQ5 300 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ARV1Q9H2C2 271 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PRSS46E5RG02 174 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 CD5LO43866 347 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 FBXO24O75426 580 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 AANATQ16613 207 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ABHD5Q8WTS1 349 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 P2RX4Q99571 388 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
CDK5RAP3-201ENST00000338399 A6NDX4 124 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 IFNA5P01569 189 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 HLA-DRB1P01911 266 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ATP5IP56385 69 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 NDPQ00604 133 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 FAM74A1Q5RGS3 127 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 C5orf56Q8N8D9 126 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TMED6Q8WW62 240 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ARPC1AQ92747 370 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PHYHIPLQ96FC7 376 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 GINS3Q9BRX5 216 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TMEM147Q9BVK8 224 aa11.69□□□□□ -0.54
CDK5RAP3-201ENST00000338399 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 UBE2L5PA0A1B0GUS4 154 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 C19orf35Q6ZS72 473 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PCNPQ8WW12 178 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SPNS3Q6ZMD2 512 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 HSD17B13Q7Z5P4 300 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SRSF8Q9BRL6 282 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SLC25A32Q9H2D1 315 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PITPNC1Q9UKF7 332 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
CDK5RAP3-201ENST00000338399 FGF16O43320 207 aa11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 IGHV4-59P01825 116 aa11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 IER3P46695 156 aa11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 RUNX1Q01196 453 aa11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SCGB1C1Q8TD33 95 aa11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 FBXO7Q9Y3I1 522 aa11.67□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SMCO3A2RU48 225 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 AMY1AP04745 511 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 DLK1P80370 383 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 MLANAQ16655 118 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 EIF5AL1Q6IS14 154 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TEX29Q8N6K0 151 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ACANP16112 2415 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SPP1P10451 314 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 MFAP2P55001 183 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 Q6YL49 198 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TNFRSF19Q9NS68 423 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TMA7Q9Y2S6 64 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 F11RQ9Y624 299 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-201ENST00000338399 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TLN2Q9Y4G6 2542 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 LINC01548A6NM66 108 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 SEC11BP0C7V7 166 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 CTRB1P17538 263 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 FGF7P21781 194 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 CTRB2Q6GPI1 263 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 LFNGQ8NES3 379 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 OR1P1Q8NH06 330 aa11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 TAF15Q92804 592 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDK5RAP3-201ENST00000338399 GNPNAT1Q96EK6 184 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 487.2 ms