RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TUBA4BQ9H853 241 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 SIRT7Q9NRC8 400 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 TIMM9Q9Y5J7 89 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 H0YJW9 148 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 HRASP01112 189 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 GALR1P47211 349 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 PAX5Q02548 391 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 OR5I1Q13606 314 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 TEPPQ6URK8 271 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 C1QL4Q86Z23 238 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 KIR3DL3Q8N743 410 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 NEIL1Q96FI4 390 aaPredicted RBP7.18□□□□□ -1.26
SNCA-201ENST00000336904 COMMD5Q9GZQ3 224 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 NAT8Q9UHE5 227 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 KLF2Q9Y5W3 355 aaPredicted RBP7.18□□□□□ -1.26
SNCA-201ENST00000336904 S4R3C0 116 aa7.18□□□□□ -1.26
SNCA-201ENST00000336904 H7BYZ3 331 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 SLC17A3O00476 420 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 UPK2O00526 184 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 RBFOX2O43251 390 aaKnown RBP eCLIP7.17□□□□□ -1.26
SNCA-201ENST00000336904 OR7C2O60412 319 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 IGHV2-5P01817 119 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 PNKDQ8N490 385 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 GAL3ST2Q9H3Q3 398 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 SMDT1Q9H4I9 107 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 NPVFQ9HCQ7 196 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 ELOVL5Q9NYP7 299 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 UBE2CO00762 179 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 NDUFS7O75251 213 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 MOSP00540 346 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 CD3EP07766 207 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 SLC35B1P78383 322 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 ZNF90Q03938 601 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 WT1-ASQ06250 92 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 GAMTQ14353 236 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 PSG5Q15238 335 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 CENPVQ7Z7K6 275 aaPredicted RBP7.17□□□□□ -1.26
SNCA-201ENST00000336904 MUC15Q8N387 334 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 TCTEX1D1Q8N7M0 179 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 TMEM37Q8WXS4 190 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 FLYWCH2Q96CP2 140 aaKnown RBP7.17□□□□□ -1.26
SNCA-201ENST00000336904 ZNF430Q9H8G1 570 aaPredicted RBP7.17□□□□□ -1.26
SNCA-201ENST00000336904 JKAMPQ9P055 326 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 FOXA2Q9Y261 457 aaPredicted RBP7.17□□□□□ -1.26
SNCA-201ENST00000336904 PIEZO1Q92508 2521 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 FABP4P15090 132 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 ONECUT1Q9UBC0 465 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 ZNF835Q9Y2P0 537 aa7.17□□□□□ -1.26
SNCA-201ENST00000336904 TOX4O94842 621 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 MBP02144 154 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 APOA2P02652 100 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 OPRK1P41145 380 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 RPP30P78346 268 aaKnown RBP7.16□□□□□ -1.26
SNCA-201ENST00000336904 KLRD1Q13241 179 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 HLA-DRB5Q30154 266 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 FBLN7Q53RD9 439 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 OR10D4PQ8NGN7 298 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
SNCA-201ENST00000336904 A0A087WWC5 75 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 CGB1A6NKQ9 187 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 PYYP10082 97 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 AREGP15514 252 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 S100PP25815 95 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 NUBP1P53384 320 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 RPL8P62917 257 aaKnown RBP7.16□□□□□ -1.26
SNCA-201ENST00000336904 PRCDQ00LT1 54 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 NHLH1Q02575 133 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 RBPJQ06330 500 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 TGIF2LXQ8IUE1 241 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 NABP2Q9BQ15 211 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 FNDC4Q9H6D8 234 aaPredicted RBP7.16□□□□□ -1.26
SNCA-201ENST00000336904 FUT9Q9Y231 359 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 LSM4Q9Y4Z0 139 aaKnown RBP7.16□□□□□ -1.26
SNCA-201ENST00000336904 HILPDAQ9Y5L2 63 aa7.16□□□□□ -1.26
SNCA-201ENST00000336904 IGHV1-8P0DP01 117 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 RNASE2P10153 161 aaKnown RBP7.15□□□□□ -1.26
SNCA-201ENST00000336904 GCHFRP30047 84 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 KIR2DS2P43631 304 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 LEMD1Q68G75 181 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 ZNF833PQ6ZTB9 187 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 NPIPB3Q92617 1050 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 P2RX4Q99571 388 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 FAM103A1Q9BTL3 118 aaKnown RBP7.15□□□□□ -1.26
SNCA-201ENST00000336904 RPH3ALQ9UNE2 315 aa7.15□□□□□ -1.26
SNCA-201ENST00000336904 LINC00587B1AMM8 73 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 S100A9P06702 114 aaKnown RBP7.15□□□□□ -1.27
SNCA-201ENST00000336904 LINC00869P0C866 280 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 CRYBB3P26998 211 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 ARF6P62330 175 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 FXYD3Q14802 87 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 TNXAQ16473 311 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 LINC01551Q86U37 167 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 C11orf42Q8N5U0 333 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 OR4X1Q8NH49 305 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 MANBALQ9NQG1 85 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 PRNDQ9UKY0 176 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms