RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
HDAC5-202ENST00000336057 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
HDAC5-202ENST00000336057 COL25A1Q9BXS0 654 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-202ENST00000336057 IL4P05112 153 aa13.15□□□□□ -0.31
HDAC5-202ENST00000336057 LOXL3P58215 753 aa13.15□□□□□ -0.31
HDAC5-202ENST00000336057 RPS20P60866 119 aaKnown RBP13.15□□□□□ -0.31
HDAC5-202ENST00000336057 DPF1Q92782 380 aa13.15□□□□□ -0.31
HDAC5-202ENST00000336057 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.31
HDAC5-202ENST00000336057 ROS1P08922 2347 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 TCTAP57738 103 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 PI4KAP42356 2102 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 DPRXA6NFQ7 191 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 UPK2O00526 184 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 C1QTNF9P0C862 333 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 Q0VFX4 171 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 ATOH7Q8N100 152 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 ATG101Q9BSB4 218 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 ZNF581Q9P0T4 197 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 C5orf52A6NGY3 159 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 SIAH2O43255 324 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 TBR1Q16650 682 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 RNASEH2CQ8TDP1 164 aaKnown RBP13.14□□□□□ -0.31
HDAC5-202ENST00000336057 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 C16orf92Q96LL3 132 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 TMEM242Q9NWH2 141 aa13.14□□□□□ -0.31
HDAC5-202ENST00000336057 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 SAA1P0DJI8 122 aaPredicted RBP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 BSPH1Q075Z2 132 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 FAM57AQ8TBR7 257 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 GPR179Q6PRD1 2367 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 FOXA3P55318 350 aaPredicted RBP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 RIF1Q5UIP0 2472 aaKnown RBP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 FAM90A9PA6NNJ1 464 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 BTF3P20290 206 aaKnown RBP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 TAS2R60P59551 318 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 SRSF9Q13242 221 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 OR52E5Q8NH55 327 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 FBXL15Q9H469 300 aa13.13□□□□□ -0.31
HDAC5-202ENST00000336057 TBL2Q9Y4P3 447 aaKnown RBP13.13□□□□□ -0.31
HDAC5-202ENST00000336057 ID1P41134 155 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
HDAC5-202ENST00000336057 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 TMPRSS3P57727 454 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 C5orf24Q7Z6I8 188 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 TRBV24-1A0A075B6N3 115 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 ZNF841Q6ZN19 808 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 IGHV1-18A0A0C4DH31 117 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 ETV2O00321 342 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-202ENST00000336057 PSPNO60542 156 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 SFTPCP11686 197 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 DGAT2L7PQ6IED9 249 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 BMPERQ8N8U9 685 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 OR10J6PQ8NGY7 276 aa13.12□□□□□ -0.31
HDAC5-202ENST00000336057 KIAA2026Q5HYC2 2103 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 PLXND1Q9Y4D7 1925 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 E9PLN8 166 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 CXCL1P09341 107 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 GCSAMLQ5JQS6 135 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 Q6ZS49 121 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 TRBV6-6A0A0A6YYG2 114 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 SH2D7A6NKC9 451 aaPredicted RBP13.11□□□□□ -0.31
HDAC5-202ENST00000336057 IL18BPO95998 194 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 CCL3L1P16619 93 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 LINC01560Q8TB33 94 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 ZNF524Q96C55 264 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 MAP1LC3AQ9H492 121 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 WISP1O95388 367 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 ANOS1P23352 680 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 SPTBN1Q01082 2364 aaKnown RBP13.11□□□□□ -0.31
HDAC5-202ENST00000336057 HGFACQ04756 655 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
HDAC5-202ENST00000336057 NOTCH4Q99466 2003 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 AKAP6Q13023 2319 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 RAB9AP51151 201 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
HDAC5-202ENST00000336057 COTL1Q14019 142 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 HTN1P15515 57 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 CTAG1AP78358 180 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 FOXF2Q12947 444 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 HERPUD1Q15011 391 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 TCF24Q7RTU0 167 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 TMEM70Q9BUB7 260 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 DPM3Q9P2X0 92 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 A0A1W2PS18 150 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 EFNB3Q15768 340 aa13.1□□□□□ -0.31
HDAC5-202ENST00000336057 SAPCD1Q5SSQ6 148 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms