RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ERHP84090 104 aaKnown RBP10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 CD83Q01151 205 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 OR2C3Q8N628 320 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 ZBTB8BQ8NAP8 495 aaPredicted RBP10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 OR4D5Q8NGN0 318 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 GSKIPQ9P0R6 139 aa10.98□□□□□ -0.65
APOBEC3B-202ENST00000335760 COL6A5A8TX70 2615 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 FAM90A26D6RGX4 464 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 INS-IGF2F8WCM5 200 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 BRI3O95415 125 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 GSG1LQ6UXU4 331 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 DTD1Q8TEA8 209 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 C2orf50Q96LR7 162 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 SLA2Q9H6Q3 261 aa10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 HEYLQ9NQ87 328 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 TSSC4Q9Y5U2 329 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
APOBEC3B-202ENST00000335760 MED6O75586 246 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 SIX6O95475 246 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 SCGB1D2O95969 90 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 SNCAP37840 140 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 RPL23AP62750 156 aaKnown RBP10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 DEFA5Q01523 94 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 ID3Q02535 119 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 NSUN5P1Q3KNT7 163 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 C11orf87Q6NUJ2 197 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 SLC25A24Q6NUK1 477 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 FANCD2OSQ96PS1 177 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 P2RX4Q99571 388 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 ZFP57Q9NU63 452 aa10.96□□□□□ -0.65
APOBEC3B-202ENST00000335760 TRBV9A0A0B4J1U6 114 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 CYB5BO43169 146 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 OR2J3O76001 311 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 IAPPP10997 89 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 HIST1H1BP16401 226 aaKnown RBP10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 NKX2-1P43699 371 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 MFAP2P55001 183 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 RHOGP84095 191 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 KIAA0141Q14154 515 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 ZNF491Q8N8L2 437 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 MYOZ3Q8TDC0 251 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 HIPK2Q9H2X6 1198 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 MGAT4CQ9UBM8 478 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 FBXL7Q9UJT9 491 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 DMRT1Q9Y5R6 373 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
APOBEC3B-202ENST00000335760 IGLV11-55A0A075B6I3 123 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 FAM223BA6NKX1 122 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 ADARB2-AS1A8MUL3 147 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 WRBO00258 174 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 SYNGR2O43760 224 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 NDUFB8O95169 186 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 IGHV3-11P01762 117 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 RNASE2P10153 161 aaKnown RBP10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 CDX1P47902 265 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.663e-6■■■□□ 16.5
APOBEC3B-202ENST00000335760 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 C18orf65Q6ZTR6 163 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 FAM223AQ8IWN6 122 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 ZNF114Q8NC26 417 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 NECAP1Q8NC96 275 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 OR1L6Q8NGR2 347 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 OR1P1Q8NH06 330 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 SPATA3Q8NHX4 192 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 OR5B12Q96R08 314 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 MED28Q9H204 178 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 GNB4Q9HAV0 340 aa10.94□□□□□ -0.66
APOBEC3B-202ENST00000335760 A0A0G2JLM5 398 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 HTR2BP41595 481 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 KLK9Q2XQG4 91 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 KLHL30-AS1Q8NEE0 82 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 MISP3Q96FF7 219 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 THYN1Q9P016 225 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 KLK9Q9UKQ9 250 aa10.93□□□□□ -0.66
APOBEC3B-202ENST00000335760 SSSCA1O60232 199 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 IFNA10P01566 189 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 H2BFSP57053 126 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 FCN2Q15485 313 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 C15orf32Q32M92 178 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 BSXQ3C1V8 233 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 SLC24A4Q8NFF2 622 aa10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 CIB3Q96Q77 187 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 LSM5Q9Y4Y9 91 aaKnown RBP10.92□□□□□ -0.66
APOBEC3B-202ENST00000335760 NPY1RP25929 384 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 S100A10P60903 97 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 EXOSC2Q13868 293 aaKnown RBP10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 C8orf86Q6ZUL3 223 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 C4orf3Q8WVX3 66 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 NMES1Q9C002 83 aa10.91□□□□□ -0.66
APOBEC3B-202ENST00000335760 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms