RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SZRD1Q7Z422 152 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 COMMD7Q86VX2 200 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 DHFR2Q86XF0 187 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM99Q8N816 258 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR52E5Q8NH55 327 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 Q8TAT8 98 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SKA2Q8WVK7 121 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 INTS14Q96SY0 518 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CNN2Q99439 309 aaKnown RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RASL11BQ9BPW5 248 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 MARVELD1Q9BSK0 173 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RSRP1Q9BUV0 290 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 FNDC11Q9BVV2 318 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ACTR3CQ9C0K3 210 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 METTL9Q9H1A3 318 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR52D1Q9H346 318 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 LIN28AQ9H9Z2 209 aaKnown RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 HMG20AQ9NP66 347 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 C1orf123Q9NWV4 160 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 BET1LQ9NYM9 111 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 STEAP1Q9UHE8 339 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 AP4S1Q9Y587 144 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 LENEPQ9Y5L5 61 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 LAMA3Q16787 3333 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IGLV10-54A0A075B6I4 117 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 IGHV4OR15-8A0A075B7B6 117 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TRAV30A0A087WSZ9 112 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 A0A087WW49 117 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 A0A087WWC5 75 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TRGV10A0A0A0MS01 117 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 A0A0B4J2A0 478 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TRDV1A0A1B0GX56 115 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 DHRS12A0PJE2 317 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR4C45A6NMZ5 311 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM14DPA8MWL7 114 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 J3QLW9 94 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SCGB2A1O75556 95 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 GADD45GO95257 159 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ARG1P05089 322 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 LCKP06239 509 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HTR1AP08908 422 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 METTL15P1P0C7V9 234 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CPEP16870 476 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF19P17023 458 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SNCAP37840 140 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 EIF2B2P49770 351 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HNRNPA3P51991 378 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CCL18P55774 89 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 RBX1P62877 108 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FABP5Q01469 135 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FGL1Q08830 312 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ST3GAL4Q11206 333 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 HSPB3Q12988 150 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 C1DQ13901 141 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 Q5BKY6 102 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 GLYATQ6IB77 296 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CYP2R1Q6VVX0 501 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF730Q6ZMV8 503 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FAM19A2Q8N3H0 131 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 METTL27Q8N6F8 245 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ACBD7Q8N6N7 88 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 BVESQ8NE79 360 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR11H1Q8NG94 326 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 OR4D10Q8NGI6 311 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 VSTM2AQ8TAG5 236 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM167AQ8TBQ9 72 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 LRRC20Q8TCA0 184 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF431Q8TF32 576 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 EEF1AKMT3Q96AZ1 226 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 Q96M85 177 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NRTNQ99748 197 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PYGO2Q9BRQ0 406 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 NIPSNAP3BQ9BS92 247 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 Q9H521 79 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 GEMIN7Q9H840 131 aaKnown RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ACOT13Q9NPJ3 140 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CENPMQ9NSP4 180 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SHPKQ9UHJ6 478 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SLC7A11Q9UPY5 501 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CBY1Q9Y3M2 126 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 V9GYH0 126 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FREM2Q5SZK8 3169 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 XKRY2A2RUG3 117 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 FABP12A6NFH5 140 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 C9orf118A6NHY6 69 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 IFITM10A6NMD0 228 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SERPINE3A8MV23 424 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 AIPO00170 330 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 XKRYO14609 159 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PDCD5O14737 125 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SOCS1O15524 211 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 GPR42O15529 346 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 ENTPD6O75354 484 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 IFNA21P01568 189 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 IFNA17P01571 189 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 CXCL1P09341 107 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SULT1A3P0DMM9 295 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SULT1A4P0DMN0 295 aa0.98□□□□□ -2.25
LINC00643-201ENST00000334389 SLC2A2P11168 524 aaPredicted RBP0.98□□□□□ -2.25
LINC00643-201ENST00000334389 PSG1P11464 419 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms