RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 DTX2Q86UW9 622 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 VSTM2AQ8TAG5 236 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 C8orf46Q8TAG6 207 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 ITLN2Q8WWU7 325 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-201ENST00000333617 COMMD5Q9GZQ3 224 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 SLC25A22Q9H936 323 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 NPVFQ9HCQ7 196 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 RPS10P5Q9NQ39 176 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 SMCO4Q9NRQ5 59 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 ABCA1O95477 2261 aa7.05□□□□□ -1.28
LSAMP-201ENST00000333617 LOC105371267A0A1B0GV96 52 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 C7orf77A4D0Y5 90 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 CYB5BO43169 146 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 LIPFP07098 398 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 FBP1P09467 338 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 RPL8P62917 257 aaKnown RBP7.04□□□□□ -1.28
LSAMP-201ENST00000333617 PMS2P11Q13670 270 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 RHEBQ15382 184 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 HLA-DRB5Q30154 266 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 RBMS3Q6XE24 437 aaKnown RBP7.04□□□□□ -1.28
LSAMP-201ENST00000333617 Q8N7P7 452 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 CYB561D1Q8N8Q1 229 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 OR1L8Q8NGR8 309 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM167AQ8TBQ9 72 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 P2RX4Q99571 388 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 C20orf24Q9BUV8 137 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 CLEC7AQ9BXN2 247 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 CHODLQ9H9P2 273 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 KCNIP2Q9NS61 270 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 VAX2Q9UIW0 290 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 PUS1Q9Y606 427 aaKnown RBP eCLIP7.04□□□□□ -1.28
LSAMP-201ENST00000333617 USP24Q9UPU5 2620 aa7.04□□□□□ -1.28
LSAMP-201ENST00000333617 MAP1AP78559 2803 aaPredicted RBP7.04□□□□□ -1.28
LSAMP-201ENST00000333617 FNDC10F2Z333 226 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 HMGB3O15347 200 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 ENSAO43768 121 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 EIF3GO75821 320 aaKnown RBP eCLIP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 AKR1C3P42330 323 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 LGALS7P47929 136 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 CDC34P49427 236 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 RAB31Q13636 194 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 VMA21Q3ZAQ7 101 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 TEPPQ6URK8 271 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 LY6G5BQ8NDX9 201 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 BEND2Q8NDZ0 799 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 MGST2Q99735 147 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 GGTLC1Q9BX51 225 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 NDUFA4L2Q9NRX3 87 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 ONECUT1Q9UBC0 465 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 AMMECR1Q9Y4X0 333 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 USP9XQ93008 2570 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 UTP20O75691 2785 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1W2PN81 502 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1W2PPV4 95 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 SEC14L6B5MCN3 397 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 H3BQ15 152 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 BUB1B-PAK6H3BSN5 160 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 SLC25A17O43808 307 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 COX7A1P24310 79 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 CHRNA7P36544 502 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 TAGLN2P37802 199 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 PSMB3P49720 205 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 DLX1P56177 255 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 ERHP84090 104 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 BSXQ3C1V8 233 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 C2orf83Q53S99 150 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 NIPSNAP3BQ9BS92 247 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 UBTD1Q9HAC8 227 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 PATZ1Q9HBE1 687 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 MANBALQ9NQG1 85 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 LSM4Q9Y4Z0 139 aaKnown RBP7.03□□□□□ -1.28
LSAMP-201ENST00000333617 INSIG2Q9Y5U4 225 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 PXMP4Q9Y6I8 212 aa7.03□□□□□ -1.28
LSAMP-201ENST00000333617 DOPEY1Q5JWR5 2465 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 A0A1W2PPR1 153 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 C22orf46C9J442 243 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 INS-IGF2F8WCM5 200 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 YIF1AO95070 293 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 PF4P02776 101 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 RNASE2P10153 161 aaKnown RBP7.02□□□□□ -1.29
LSAMP-201ENST00000333617 MEF2BQ02080 365 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-201ENST00000333617 PRB3Q04118 309 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-201ENST00000333617 MIC13Q5XKP0 118 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 CRYBG3Q68DQ2 2970 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 SLC35E3Q7Z769 313 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 MOB3BQ86TA1 216 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 IQCF2Q8IXL9 164 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 PNKDQ8N490 385 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 C15orf54Q8N8G6 183 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 OR10W1Q8NGF6 305 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 TVP23CQ96ET8 276 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 C1orf159Q96HA4 380 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 SSBP3Q9BWW4 388 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-201ENST00000333617 TMPRSS5Q9H3S3 457 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 ZNF430Q9H8G1 570 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-201ENST00000333617 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
LSAMP-201ENST00000333617 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms