RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
BRCC3-201ENST00000330045 PSG5Q15238 335 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 GAFA1Q96PS6 74 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 SLC25A10Q9UBX3 287 aaPredicted RBP12.56□□□□□ -0.4
BRCC3-201ENST00000330045 SLC45A2Q9UMX9 530 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 ZNF257Q9Y2Q1 563 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 RNF224P0DH78 156 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 CBLN1P23435 193 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 SELENOTP62341 195 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 TNFAIP6P98066 277 aaPredicted RBP12.56□□□□□ -0.4
BRCC3-201ENST00000330045 PRCDQ00LT1 54 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 USF2Q15853 346 aaPredicted RBP12.56□□□□□ -0.4
BRCC3-201ENST00000330045 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 FAM122AQ96E09 287 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 MS4A10Q96PG2 267 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 CCL13Q99616 98 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 NABP2Q9BQ15 211 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 IL19Q9UHD0 177 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 TANC2Q9HCD6 1990 aa12.56□□□□□ -0.4
BRCC3-201ENST00000330045 CHD8Q9HCK8 2581 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 UPK2O00526 184 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 MMP23AO75900 390 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 SELENOVP59797 346 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 RAB4BP61018 213 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 CMTM2Q8TAZ6 248 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 TMEM167BQ9NRX6 74 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 TLN1Q9Y490 2541 aaKnown RBP12.55□□□□□ -0.4
BRCC3-201ENST00000330045 IGKV1-16P04430 117 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 CT45A6P0DMU7 189 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 CT45A5P0DMU8 189 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 CT45A7P0DMV0 189 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 NDUFB7P17568 137 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 ERVFC1-1P60608 527 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 Q6ZS92 163 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 MOB3BQ86TA1 216 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 SPACA3Q8IXA5 215 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 MRPL18Q9H0U6 180 aaKnown RBP12.55□□□□□ -0.4
BRCC3-201ENST00000330045 SLC35D1Q9NTN3 355 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
BRCC3-201ENST00000330045 HELTA6NFD8 242 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 SRRM4A7MD48 611 aaKnown RBP12.54□□□□□ -0.4
BRCC3-201ENST00000330045 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 LGALS4P56470 323 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 RTL8BQ17RB0 113 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 RPEL1Q2QD12 228 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 IGFL3Q6UXB1 125 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 FAM216BQ8N7L0 139 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 LINC00574Q9H8X3 128 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 IGKV1OR2-108A0A075B7D4 117 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 CRYBB3P26998 211 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 OR5I1Q13606 314 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 ZNF788Q6ZQV5 615 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 SLC25A48Q6ZT89 311 aaKnown RBP12.54□□□□□ -0.4
BRCC3-201ENST00000330045 OR1L6Q8NGR2 347 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 ABHD17AQ96GS6 310 aa12.54□□□□□ -0.4
BRCC3-201ENST00000330045 TECRQ9NZ01 308 aaKnown RBP12.54□□□□□ -0.4
BRCC3-201ENST00000330045 RPUSD1Q9UJJ7 312 aaKnown RBP12.54□□□□□ -0.4
BRCC3-201ENST00000330045 CRISP2P16562 243 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 OR10J1P30954 320 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 GNG4P50150 75 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 MMD2Q8IY49 270 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 SLC35E1Q96K37 410 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 V9GYV3 84 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 FCN1O00602 326 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 GATA2P23769 480 aaPredicted RBP12.53□□□□□ -0.4
BRCC3-201ENST00000330045 KRTCAP3Q53RY4 240 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 C2orf83Q53S99 150 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 CENPWQ5EE01 88 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 ZNRD1Q9P1U0 126 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
BRCC3-201ENST00000330045 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
BRCC3-201ENST00000330045 OR7C2O60412 319 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 TNFSF4P23510 183 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 IER3P46695 156 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 ATP5IP56385 69 aaPredicted RBP12.52□□□□□ -0.4
BRCC3-201ENST00000330045 PAFAH1B2P68402 229 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 TMEM30BQ3MIR4 351 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 C1orf194Q5T5A4 169 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 ZNF503Q96F45 646 aa12.52□□□□□ -0.4
BRCC3-201ENST00000330045 TPPP2P59282 170 aa12.52□□□□□ -0.41
BRCC3-201ENST00000330045 MLANAQ16655 118 aa12.52□□□□□ -0.41
BRCC3-201ENST00000330045 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
BRCC3-201ENST00000330045 SNRNP40Q96DI7 357 aaKnown RBP12.52□□□□□ -0.41
BRCC3-201ENST00000330045 C19orf24Q9BVV8 132 aa12.52□□□□□ -0.41
BRCC3-201ENST00000330045 TMEM106BQ9NUM4 274 aa12.52□□□□□ -0.41
BRCC3-201ENST00000330045 BET1LQ9NYM9 111 aa12.52□□□□□ -0.41
BRCC3-201ENST00000330045 KALRNO60229 2985 aa12.52□□□□□ -0.41
BRCC3-201ENST00000330045 ZNF705FA8MVS1 300 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-201ENST00000330045 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
BRCC3-201ENST00000330045 ZNF705DP0CH99 300 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-201ENST00000330045 ZNF705BP0CI00 300 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-201ENST00000330045 SAA1P0DJI8 122 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-201ENST00000330045 TAS2R45P59539 299 aa12.51□□□□□ -0.41
BRCC3-201ENST00000330045 OR8I2Q8N0Y5 310 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms