RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 FOXA2Q9Y261 457 aaPredicted RBP7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 MPC1Q9Y5U8 109 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 DOCK1Q14185 1865 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 A0A1B0GW15 77 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 CHTOPQ9Y3Y2 248 aaKnown RBP7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 CASP8AP2Q9UKL3 1982 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 TNFRSF9Q07011 255 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 SRSF1Q07955 248 aaKnown RBP eCLIP7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 C21orf62Q9NYP8 219 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 LSM4Q9Y4Z0 139 aaKnown RBP7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 MMP23AO75900 390 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 PRR4Q16378 134 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 C2orf82Q6UX34 121 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 GDF15Q99988 308 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 KLHDC2Q9Y2U9 406 aa7.56□□□□□ -1.2
SH3TC2-201ENST00000323829 PRR33A8MZF0 331 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 ZNF561-AS1K7EIQ3 104 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 PPYP01298 95 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 COQ2Q96H96 371 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 TIMM17AQ99595 171 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 ESPL1Q14674 2120 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 NPIPB11E5RHQ5 1161 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 PPIFP30405 207 aaKnown RBP7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 RUNX1Q01196 453 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 CNRIP1Q96F85 164 aaPredicted RBP7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 DNAJC30Q96LL9 226 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 SLC50A1Q9BRV3 221 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 LIFP15018 202 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 UBE2BP63146 152 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 IGLV3-16A0A075B6K0 115 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 MORN3Q6PF18 240 aaPredicted RBP7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 ZP4Q12836 540 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 ORMDL3Q8N138 153 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 OR5P3Q8WZ94 311 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 GAGE1Q13065 139 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 GAGE4Q13068 117 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 GAGE5Q13069 117 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 GAGE6Q13070 117 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 TMEM256Q8N2U0 113 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 MS4A3Q96HJ5 214 aa7.55□□□□□ -1.2
SH3TC2-201ENST00000323829 LINC01560Q8TB33 94 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM57AQ8TBR7 257 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 ITLN1Q8WWA0 313 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 IGHV4-28A0A0C4DH34 117 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 CD300EQ496F6 205 aaPredicted RBP7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 SPRED2Q7Z698 418 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 POC1AQ8NBT0 407 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 RPRMQ9NS64 109 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 DSPPQ9NZW4 1301 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM90A18PA6NE21 464 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM90A16PA6NEW6 464 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM90A9PA6NNJ1 464 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM90A5PA8MXJ8 464 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 LEPROTO15243 131 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM90A15PP0C7V4 464 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM90A14PP0C7W9 464 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 PEBP1P30086 187 aaKnown RBP7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 CACNG8Q8WXS5 425 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 C19orf24Q9BVV8 132 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 COLCA1Q6ZS62 124 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 RGPD4Q7Z3J3 1758 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 ZNF831Q5JPB2 1677 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 ASPHD2Q6ICH7 369 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 DKK4Q9UBT3 224 aa7.54□□□□□ -1.2
SH3TC2-201ENST00000323829 LINC00587B1AMM8 73 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 CDC42EP2O14613 210 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 METRNQ9UJH8 293 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 TPRP12270 2363 aaKnown RBP7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 TRGV1A0A0A0MS02 117 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 DDTP30046 118 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 NBL1P41271 181 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 SLC25A1P53007 311 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 CFHR3Q02985 330 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 ZNF645Q8N7E2 425 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 EPOPA6NHQ4 379 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 IGKV1D-33P01593 117 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 IGKV1-33P01594 117 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 CEACAM1P13688 526 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 TAF15Q92804 592 aaKnown RBP eCLIP7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 FAM168AQ92567 244 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 CHCHD1Q96BP2 118 aaKnown RBP7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 FBXL7Q9UJT9 491 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 PILRBQ9UKJ0 227 aa7.53□□□□□ -1.2
SH3TC2-201ENST00000323829 RS1O15537 224 aa7.52□□□□□ -1.2
SH3TC2-201ENST00000323829 TEX45Q8NA69 505 aa7.52□□□□□ -1.2
SH3TC2-201ENST00000323829 ASB10Q8WXI3 467 aa7.52□□□□□ -1.2
SH3TC2-201ENST00000323829 NPDC1Q9NQX5 325 aaPredicted RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms