RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CD69Q07108 199 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 SSX2Q16385 188 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 FFAR4Q5NUL3 377 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 C10orf55Q5SWW7 151 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 RPP25LQ8N5L8 163 aaKnown RBP14.27□□□□□ -0.12
RAB39A-201ENST00000320578 Q8N6K4 173 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 PERPQ96FX8 193 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 NARS2Q96I59 477 aaKnown RBP14.27□□□□□ -0.12
RAB39A-201ENST00000320578 OR13C7P0DN81 318 aa14.27□□□□□ -0.13
RAB39A-201ENST00000320578 ZNF726P1Q15940 193 aa14.27□□□□□ -0.13
RAB39A-201ENST00000320578 TNXAQ16473 311 aa14.27□□□□□ -0.13
RAB39A-201ENST00000320578 AJUBAQ96IF1 538 aa14.27□□□□□ -0.13
RAB39A-201ENST00000320578 MGST2Q99735 147 aa14.27□□□□□ -0.13
RAB39A-201ENST00000320578 FBXL15Q9H469 300 aa14.27□□□□□ -0.13
RAB39A-201ENST00000320578 CTXND1A0A1B0GTU2 59 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 CYB5BO43169 146 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 RPL29P47914 159 aaKnown RBP14.26□□□□□ -0.13
RAB39A-201ENST00000320578 ELLP55199 621 aaPredicted RBP14.26□□□□□ -0.13
RAB39A-201ENST00000320578 MMDQ15546 238 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 OR10G4Q8NGN3 311 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 OR10G9Q8NGN4 311 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 OR10G7Q8NGN6 311 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 P2RX4Q99571 388 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 GGTLC1Q9BX51 225 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 ACTR3CQ9C0K3 210 aaPredicted RBP14.26□□□□□ -0.13
RAB39A-201ENST00000320578 FAM96BQ9Y3D0 163 aa14.26□□□□□ -0.13
RAB39A-201ENST00000320578 AKAP6Q13023 2319 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 SEC14L6B5MCN3 397 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 CCL20P78556 96 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 AKR1C1Q04828 323 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 TMEM249Q2WGJ8 235 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 ZNF787Q6DD87 383 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 DYNAPQ8N1N2 210 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 COL12A1Q99715 3063 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 SLC39A9Q9NUM3 307 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 BEX4Q9NWD9 120 aaPredicted RBP14.25□□□□□ -0.13
RAB39A-201ENST00000320578 A0A1W2PRD5 423 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 A0A1W2PRF3 423 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 A0A1W2PRM7 423 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 RBFOX3A6NFN3 312 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 NPFFO15130 113 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 BRS3P32247 399 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 OR1P1Q8NH06 330 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 EIF5A2Q9GZV4 153 aaKnown RBP14.25□□□□□ -0.13
RAB39A-201ENST00000320578 TMEM231Q9H6L2 316 aa14.25□□□□□ -0.13
RAB39A-201ENST00000320578 TEX22C9J3V5 150 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 CORTO00230 105 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 SSBP2P81877 361 aaPredicted RBP14.24□□□□□ -0.13
RAB39A-201ENST00000320578 GAMTQ14353 236 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 PLGLAQ15195 96 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 C5orf64Q2M2E5 130 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 ZNF506Q5JVG8 444 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 ETFRF1Q6IPR1 90 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 LRRC75A-AS1Q8N1F1 130 aa14.24□□□□□ -0.13
RAB39A-201ENST00000320578 SRSF12Q8WXF0 261 aaKnown RBP14.24□□□□□ -0.13
RAB39A-201ENST00000320578 CENPVL3A0A0U1RRI6 287 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 MAP1LC3B2A6NCE7 125 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 F8W036 122 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 NDUFS6O75380 124 aaKnown RBP14.23□□□□□ -0.13
RAB39A-201ENST00000320578 APOC3P02656 99 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 FAM106CPP0CH98 169 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 ADCYAP1P18509 176 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 GATA3P23771 443 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 CLEC12BQ2HXU8 276 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 SLC16A13Q7RTY0 426 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 MAP1LC3BQ9GZQ8 125 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 PXMP4Q9Y6I8 212 aa14.23□□□□□ -0.13
RAB39A-201ENST00000320578 B4DSR2 109 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 C9JQL5 133 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 MSMBP08118 114 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 SFTA3P0C7M3 94 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 SAA4P35542 130 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 TAGLN2P37802 199 aaKnown RBP14.22□□□□□ -0.13
RAB39A-201ENST00000320578 PRR20EP86478 221 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 PRR20CP86479 221 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 PRR20DP86480 221 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 PRR20BP86481 221 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 PRR20AP86496 221 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 KHDC3LQ587J8 217 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 SVBPQ8N300 66 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 NRGNQ92686 78 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 C1RLQ9NZP8 487 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 SLC45A2Q9UMX9 530 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 FCN1O00602 326 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 YIF1AO95070 293 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 HSPB1P04792 205 aaKnown RBP14.22□□□□□ -0.13
RAB39A-201ENST00000320578 CRYGCP07315 174 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 HES1Q14469 280 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 LCN15Q6UWW0 184 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 SSX7Q7RTT5 188 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 OR1L6Q8NGR2 347 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 C17orf50Q8WW18 174 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 SLC35B3Q9H1N7 401 aa14.22□□□□□ -0.13
RAB39A-201ENST00000320578 F11RQ9Y624 299 aaKnown RBP14.22□□□□□ -0.13
RAB39A-201ENST00000320578 TRAV20A0A0B4J274 112 aa14.21□□□□□ -0.13
RAB39A-201ENST00000320578 IGHV1-69DA0A0B4J2H0 117 aa14.21□□□□□ -0.13
RAB39A-201ENST00000320578 J3QKU1 62 aa14.21□□□□□ -0.13
RAB39A-201ENST00000320578 IGHV1-69P01742 117 aa14.21□□□□□ -0.13
RAB39A-201ENST00000320578 PLA2G2AP14555 144 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms