RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 HOXD3P31249 432 aaPredicted RBP12.75□□□□□ -0.37
LRRC42-201ENST00000319223 PPP1R1AQ13522 171 aa12.75□□□□□ -0.37
LRRC42-201ENST00000319223 ANKRD55Q3KP44 614 aa12.75□□□□□ -0.37
LRRC42-201ENST00000319223 LYZL2Q7Z4W2 148 aa12.75□□□□□ -0.37
LRRC42-201ENST00000319223 CENPSQ8N2Z9 138 aa12.75□□□□□ -0.37
LRRC42-201ENST00000319223 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
LRRC42-201ENST00000319223 CCDC32Q9BV29 185 aa12.75□□□□□ -0.37
LRRC42-201ENST00000319223 MFSD2BA6NFX1 497 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 CENPXA8MT69 81 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 DHFRP00374 187 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
LRRC42-201ENST00000319223 VAMP1P23763 118 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 HSD17B13Q7Z5P4 300 aaPredicted RBP12.74□□□□□ -0.37
LRRC42-201ENST00000319223 IL22RA2Q969J5 263 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 CCDC140Q96MF4 163 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 CACNG5Q9UF02 275 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 F11RQ9Y624 299 aaKnown RBP12.74□□□□□ -0.37
LRRC42-201ENST00000319223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.74□□□□□ -0.37
LRRC42-201ENST00000319223 OVOL1O14753 267 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 LYRM1O43325 122 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 SFT2D2O95562 160 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 DUS4LO95620 317 aaKnown RBP12.74□□□□□ -0.37
LRRC42-201ENST00000319223 SLC25A24Q6NUK1 477 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 OR2C3Q8N628 320 aa12.74□□□□□ -0.37
LRRC42-201ENST00000319223 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 PPP5D1E7EU14 171 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 BMPR1BO00238 502 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 IFNA17P01571 189 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 KRTAP10-11P60412 298 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 NMSQ5H8A3 153 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 LGI3Q8N145 548 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
LRRC42-201ENST00000319223 TBC1D24Q9ULP9 559 aa12.73□□□□□ -0.37
LRRC42-201ENST00000319223 IGHV3-21A0A0B4J1V1 117 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 A0A0B4J2A0 478 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 NXPH3O95157 252 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 HLA-AP01891 365 aaKnown RBP12.72□□□□□ -0.37
LRRC42-201ENST00000319223 ANXA3P12429 323 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 ANXA7P20073 488 aaKnown RBP12.72□□□□□ -0.37
LRRC42-201ENST00000319223 IFITM3Q01628 133 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 KLF5Q13887 457 aaPredicted RBP12.72□□□□□ -0.37
LRRC42-201ENST00000319223 AARDQ4LEZ3 155 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.72□□□□□ -0.37
LRRC42-201ENST00000319223 SHPKQ9UHJ6 478 aa12.72□□□□□ -0.37
LRRC42-201ENST00000319223 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
LRRC42-201ENST00000319223 C11orf87Q6NUJ2 197 aa12.71□□□□□ -0.37
LRRC42-201ENST00000319223 EEF1AKMT3Q96AZ1 226 aa12.71□□□□□ -0.37
LRRC42-201ENST00000319223 C9orf170A2RU37 121 aa12.71□□□□□ -0.38
LRRC42-201ENST00000319223 ZP3P21754 424 aa12.71□□□□□ -0.38
LRRC42-201ENST00000319223 SYNJ2BPP57105 145 aa12.71□□□□□ -0.38
LRRC42-201ENST00000319223 OR1P1Q8NH06 330 aa12.71□□□□□ -0.38
LRRC42-201ENST00000319223 PDCD10Q9BUL8 212 aa12.71□□□□□ -0.38
LRRC42-201ENST00000319223 WDR12Q9GZL7 423 aaKnown RBP12.71□□□□□ -0.38
LRRC42-201ENST00000319223 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.38
LRRC42-201ENST00000319223 K7EIM0 57 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 WIPF1O43516 503 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 SRPXP78539 464 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
LRRC42-201ENST00000319223 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 C9orf66Q5T8R8 295 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 ZNF502Q8TBZ5 544 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 THYN1Q9P016 225 aa12.7□□□□□ -0.38
LRRC42-201ENST00000319223 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 UPK1BO75841 260 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 OR2C1O95371 312 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 TCRBP04435 133 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 CLEC3BP05452 202 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 OR4E1P0C645 316 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 SULT1A3P0DMM9 295 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 SULT1A4P0DMN0 295 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 SPCS3P61009 180 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 UBE2MP61081 183 aaKnown RBP12.69□□□□□ -0.38
LRRC42-201ENST00000319223 RPEL1Q2QD12 228 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 ACSM6Q6P461 480 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 OR52E5Q8NH55 327 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 SCARB1Q8WTV0 552 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 CXorf58Q96LI9 332 aa12.69□□□□□ -0.38
LRRC42-201ENST00000319223 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 F8W735 103 aaPredicted RBP12.68□□□□□ -0.38
LRRC42-201ENST00000319223 IGHV3-48P01763 117 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
LRRC42-201ENST00000319223 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
LRRC42-201ENST00000319223 IL34Q6ZMJ4 242 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 VN1R17PQ8TDU5 208 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 AURKAIP1Q9NWT8 199 aaPredicted RBP12.68□□□□□ -0.38
LRRC42-201ENST00000319223 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 TRAV6A0A075B6T7 132 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 I3L2K1 104 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 HOXB5P09067 269 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 RNASE2P10153 161 aaKnown RBP12.68□□□□□ -0.38
LRRC42-201ENST00000319223 GPR183P32249 361 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 ARL3P36405 182 aa12.68□□□□□ -0.38
LRRC42-201ENST00000319223 DHRS2Q13268 280 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms