RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 TEX13DA0A0J9YY54 714 aaPredicted RBP12.2□□□□□ -0.46
HDDC2-201ENST00000318787 FABP12A6NFH5 140 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 OR2T8A6NH00 312 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
HDDC2-201ENST00000318787 TNFSF8P32971 234 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 GUCA2BQ16661 112 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 Q8N402 240 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 MISP3Q96FF7 219 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 U3KQK5 164 aa12.2□□□□□ -0.46
HDDC2-201ENST00000318787 C2orf70A6NJV1 201 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 IGHV4-30-4P0DP06 118 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 FOLR2P14207 255 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■□□ 17.1
HDDC2-201ENST00000318787 MFAP2P55001 183 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
HDDC2-201ENST00000318787 Q56UQ5 140 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 SBSPONQ8IVN8 264 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 PDCD10Q9BUL8 212 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 RABL2AQ9UBK7 228 aaPredicted RBP12.19□□□□□ -0.46
HDDC2-201ENST00000318787 RSL24D1Q9UHA3 163 aaKnown RBP12.19□□□□□ -0.46
HDDC2-201ENST00000318787 RABL2BQ9UNT1 228 aa12.19□□□□□ -0.46
HDDC2-201ENST00000318787 LCE2BO14633 110 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 CTDSPLO15194 276 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 ATG12O94817 140 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 IFNA17P01571 189 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 IGKV1-5P01602 117 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 CTSDP07339 412 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-201ENST00000318787 ADAMTSL5Q6ZMM2 481 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 SLC35G3Q8N808 338 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 OR51S1Q8NGJ8 323 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 PINX1Q96BK5 328 aaKnown RBP12.18□□□□□ -0.46
HDDC2-201ENST00000318787 RRNAD1Q96FB5 475 aaKnown RBP12.18□□□□□ -0.46
HDDC2-201ENST00000318787 SIGLEC8Q9NYZ4 499 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 LGALS9O00182 355 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 TGOLN2O43493 480 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 OR5AC1P0C628 307 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 S100A5P33763 92 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 CD81P60033 236 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 TM4SF20Q53R12 229 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 PYDC2Q56P42 97 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 Q8N1Y9 231 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 VN1R17PQ8TDU5 208 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 PRRT1Q99946 306 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 TUBA4BQ9H853 241 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
HDDC2-201ENST00000318787 IGHV3OR16-8A0A075B7F1 116 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 ANKRD20A5PA0PJZ0 165 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 IGHV3-48P01763 117 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 CBLN1P23435 193 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 HOXA1P49639 335 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-201ENST00000318787 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
HDDC2-201ENST00000318787 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
HDDC2-201ENST00000318787 KLK9Q2XQG4 91 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 UNQ9165/PRO28630Q6UXU0 137 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 CADM3Q8N126 398 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 SCARB1Q8WTV0 552 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 WDR89Q96FK6 387 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-201ENST00000318787 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 C20orf24Q9BUV8 137 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 PALMDQ9NP74 551 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 KLK9Q9UKQ9 250 aa12.17□□□□□ -0.46
HDDC2-201ENST00000318787 TMEM213A2RRL7 107 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 ST8SIA3O43173 380 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 GSTZ1O43708 216 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-201ENST00000318787 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 BTNL8Q6UX41 500 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 OR2C3Q8N628 320 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 UXS1Q8NBZ7 420 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 RTBDNQ9BSG5 229 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-201ENST00000318787 THAP7Q9BT49 309 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-201ENST00000318787 C5orf66Q9H5L9 145 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 NAA60Q9H7X0 242 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 SCP2D1Q9UJQ7 156 aa12.16□□□□□ -0.46
HDDC2-201ENST00000318787 K7EIM0 57 aa12.15□□□□□ -0.46
HDDC2-201ENST00000318787 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
HDDC2-201ENST00000318787 UCP1P25874 307 aa12.15□□□□□ -0.46
HDDC2-201ENST00000318787 SNCAP37840 140 aa12.15□□□□□ -0.46
HDDC2-201ENST00000318787 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-201ENST00000318787 OR1P1Q8NH06 330 aa12.15□□□□□ -0.46
HDDC2-201ENST00000318787 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.46
HDDC2-201ENST00000318787 NXF2Q9GZY0 626 aaKnown RBP12.15□□□□□ -0.46
HDDC2-201ENST00000318787 SLC2A8Q9NY64 477 aa12.15□□□□□ -0.46
HDDC2-201ENST00000318787 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
HDDC2-201ENST00000318787 UFC1Q9Y3C8 167 aa12.15□□□□□ -0.46
HDDC2-201ENST00000318787 A0A0B4J293 547 aa12.14□□□□□ -0.47
HDDC2-201ENST00000318787 A0A0G2JRQ6 117 aa12.14□□□□□ -0.47
HDDC2-201ENST00000318787 A8MWP6 167 aa12.14□□□□□ -0.47
HDDC2-201ENST00000318787 ZNF207O43670 478 aaKnown RBP12.14□□□□□ -0.47
HDDC2-201ENST00000318787 NXPH3O95157 252 aa12.14□□□□□ -0.47
HDDC2-201ENST00000318787 CD7P09564 240 aa12.14□□□□□ -0.47
HDDC2-201ENST00000318787 AKR1C4P17516 323 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms