RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OR2D2Q9H210 308 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 DCAF16Q9NXF7 216 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 RALYQ9UKM9 306 aaKnown RBP6.23□□□□□ -1.41
CNOT4-201ENST00000315544 KBTBD11-OT1A0A1B0GTJ5 212 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 H3BP45 60 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 BMPR1BO00238 502 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 PDE6DO43924 150 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 PPOXP50336 477 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 PTTG1IPP53801 180 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 ASPHD1Q5U4P2 390 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 TEX50A0A1B0GTY4 177 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 TOMM40O96008 361 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 TMEM178AQ8NBL3 297 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 GTSF1Q8WW33 167 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 CFHR4Q92496 578 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 SMIM12Q96EX1 92 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 SNX22Q96L94 193 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 RTL8AQ9BWD3 113 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 ZNRD1Q9P1U0 126 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 FBXL7Q9UJT9 491 aa6.23□□□□□ -1.41
CNOT4-201ENST00000315544 TMEM30CPA0ZSE6 113 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 A8MXE2 369 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 RNF223E7ERA6 249 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ISLRO14498 428 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 NDUFB4O95168 129 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 LTAP01374 205 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 IGHV1-46P01743 117 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 FGF6P10767 208 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 PMP22Q01453 160 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 DIAPH2-AS1Q14236 149 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 OR4A47Q6IF82 309 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 TMEM217Q8N7C4 229 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ITLN1Q8WWA0 313 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 NOL4LQ96MY1 436 aaPredicted RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 SLC25A33Q9BSK2 321 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 RPUSD1Q9UJJ7 312 aaKnown RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 A0A0G2JNJ9 132 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 SHISA9B4DS77 424 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 CRIP1P50238 77 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 RPL23AP62750 156 aaKnown RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF616Q08AN1 781 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 KIAA0141Q14154 515 aaPredicted RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 C11orf71Q6IPW1 123 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ABHD12Q8N2K0 398 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 R3HDM4Q96D70 268 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 HEATR1Q9H583 2144 aaKnown RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 Q9UFV3 132 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 PUS1Q9Y606 427 aaKnown RBP eCLIP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 DIDO1Q9BTC0 2240 aaKnown RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 UPK2O00526 184 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ARL14EPLP0DKL9 152 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 IAPPP10997 89 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 EGR2P11161 476 aaPredicted RBP6.22□□□□□ -1.41
CNOT4-201ENST00000315544 GNLYP22749 145 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 OMGP23515 440 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF83P51522 516 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF329Q86UD4 541 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 IL36BQ9NZH7 164 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 FLNCQ14315 2725 aa6.22□□□□□ -1.41
CNOT4-201ENST00000315544 TRAV38-1A0A0B4J264 116 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 LY86O95711 162 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 CCL11P51671 97 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 PRAMEF6Q5VXH4 476 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 TRAT1Q6PIZ9 186 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 RASL11AQ6T310 242 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 EIF5A2Q9GZV4 153 aaKnown RBP6.21□□□□□ -1.41
CNOT4-201ENST00000315544 GNG13Q9P2W3 67 aa6.21□□□□□ -1.41
CNOT4-201ENST00000315544 UBE2L5PA0A1B0GUS4 154 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 A0A1W2PS18 150 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 C19orf84I3L1E1 186 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 WRBO00258 174 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 GPX1P07203 203 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 OTX2P32243 289 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 LRRC75A-AS1Q8N1F1 130 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 ZNF442Q9H7R0 627 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 PPP1R3CQ9UQK1 317 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 POLDIP2Q9Y2S7 368 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 GCHFRP30047 84 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 OR10J3Q5JRS4 329 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 C1orf185Q5T7R7 199 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 ZCCHC24Q8N2G6 241 aaKnown RBP6.21□□□□□ -1.42
CNOT4-201ENST00000315544 ZNF48Q96MX3 618 aaPredicted RBP6.21□□□□□ -1.42
CNOT4-201ENST00000315544 TNCP24821 2201 aa6.21□□□□□ -1.42
CNOT4-201ENST00000315544 PIGBOS1A0A0B4J2F0 54 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 FAM166BA8MTA8 275 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 SH2D1BO14796 132 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 SCGB1D2O95969 90 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 PRDX2P32119 198 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 BRS3P32247 399 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM30BQ3MIR4 351 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TOMM20LQ6UXN7 152 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 TMEM116Q8NCL8 245 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 OR10D4PQ8NGN7 298 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 CNFNQ9BYD5 112 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 ODF3BA8MYP8 253 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 KLRC4-KLRK1H3BQV0 150 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 PAGE4O60829 102 aa6.2□□□□□ -1.42
CNOT4-201ENST00000315544 RBMXL2O75526 392 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms