RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RTN4RL2Q86UN3 420 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 IGHV3-35A0A0C4DH35 117 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 E9PQ18 207 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 SRSF7Q16629 238 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPAST-201ENST00000315285 TM4SF20Q53R12 229 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 SIAH2O43255 324 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 C2orf83Q53S99 150 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 FAM57AQ8TBR7 257 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 SPRR3Q9UBC9 169 aa11.53□□□□□ -0.56
SPAST-201ENST00000315285 C1QTNF9BB2RNN3 333 aa11.52□□□□□ -0.56
SPAST-201ENST00000315285 PLAURQ03405 335 aa11.52□□□□□ -0.56
SPAST-201ENST00000315285 RELQ04864 619 aaPredicted RBP11.52□□□□□ -0.56
SPAST-201ENST00000315285 COTL1Q14019 142 aa11.52□□□□□ -0.56
SPAST-201ENST00000315285 CX3CL1P78423 397 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.57
SPAST-201ENST00000315285 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
SPAST-201ENST00000315285 DPRXA6NFQ7 191 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 C17orf100A8MU93 164 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 RBFOX2O43251 390 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPAST-201ENST00000315285 SAA1P0DJI8 122 aaPredicted RBP11.52□□□□□ -0.57
SPAST-201ENST00000315285 UQCRFS1P47985 274 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 TFPI2P48307 235 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 SEMA5BQ9P283 1151 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 RAB9AP51151 201 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 TBR1Q16650 682 aa11.52□□□□□ -0.57
SPAST-201ENST00000315285 A0A1B0GV90 55 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 GLRX5Q86SX6 157 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 ZNF502Q8TBZ5 544 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 RNASEH2CQ8TDP1 164 aaKnown RBP11.51□□□□□ -0.57
SPAST-201ENST00000315285 POLEQ07864 2286 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 UPK2O00526 184 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 CCL3L1P16619 93 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 MBD3L1Q8WWY6 194 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 TRAV9-1A0A075B6T8 112 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 DUTP33316 252 aaKnown RBP11.51□□□□□ -0.57
SPAST-201ENST00000315285 DYNLRB2Q8TF09 96 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 NAPSAO96009 420 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 TBL2Q9Y4P3 447 aaKnown RBP11.51□□□□□ -0.57
SPAST-201ENST00000315285 THADAQ6YHU6 1953 aa11.51□□□□□ -0.57
SPAST-201ENST00000315285 K7ERU9 68 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 SAPCD1Q5SSQ6 148 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 MBNL2Q5VZF2 373 aaKnown RBP11.5□□□□□ -0.57
SPAST-201ENST00000315285 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
SPAST-201ENST00000315285 EBLN2Q6P2I7 272 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 WDR83OSQ9Y284 106 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BKO60814 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BJP06899 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BOP23527 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BBP33778 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BDP58876 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BCP62807 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 SRSF4Q08170 494 aaKnown RBP11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST2H2BEQ16778 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BHQ93079 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BNQ99877 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HIST1H2BMQ99879 126 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 CLDN16Q9Y5I7 305 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 COLCA2A8K830 154 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 TMEM42Q69YG0 159 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 HEPN1Q6WQI6 88 aa11.5□□□□□ -0.57
SPAST-201ENST00000315285 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 M0R3E3 92 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 OR9G9P0C7N8 305 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 TAS2R60P59551 318 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 ABHD17AQ96GS6 310 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 PHLDA3Q9Y5J5 127 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 NPPCP23582 126 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 CACNA1GO43497 2377 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 S4R3C0 116 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
SPAST-201ENST00000315285 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
SPAST-201ENST00000315285 INTS1Q8N201 2190 aaKnown RBP11.48□□□□□ -0.57
SPAST-201ENST00000315285 NUDT3O95989 172 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 CTAG1AP78358 180 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 WNT10AQ9GZT5 417 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
SPAST-201ENST00000315285 COL4A6Q14031 1691 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 PI4KAP42356 2102 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 FOXI3A8MTJ6 420 aaPredicted RBP11.48□□□□□ -0.57
SPAST-201ENST00000315285 UBE2CO00762 179 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 TEX45Q8NA69 505 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 Q0VFX4 171 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 GCSAMLQ5JQS6 135 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 KIAA2026Q5HYC2 2103 aa11.48□□□□□ -0.57
SPAST-201ENST00000315285 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms