RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FAM90A13PP0C7W8 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A14PP0C7W9 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A24PP0C7X0 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 RPL23P62829 140 aaKnown RBP6.93□□□□□ -1.3
VPS41-202ENST00000310301 ZNF56Q15929 161 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM74A4Q5TZK3 123 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 LINC01560Q8TB33 94 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 KCNK17Q96T54 332 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 YAE1D1Q9NRH1 226 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 TRAV9-1A0A075B6T8 112 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 IZUMO1RA6ND01 250 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 ATP5LO75964 103 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 UCP3P55916 312 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 C10orf128Q5T292 105 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 Q96M66 194 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 CUL9Q8IWT3 2517 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 IGLV1-36A0A0B4J1U3 117 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 SHISA3A0PJX4 238 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 TMEM229AB2RXF0 380 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 FOXL2P58012 376 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 TFF3Q07654 80 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 SLC25A53Q5H9E4 307 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 DTX1Q86Y01 620 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 CCL13Q99616 98 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 APOBEC3AP31941 199 aaPredicted RBP6.92□□□□□ -1.3
VPS41-202ENST00000310301 TIMP3P35625 211 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 ICAM4Q14773 271 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 PRSS53Q2L4Q9 553 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 GCSAMQ8N6F7 178 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 OR4X2Q8NGF9 303 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 CHODLQ9H9P2 273 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 IGKV3OR2-268A0A0C4DH90 116 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 TMEM262E9PQX1 116 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
VPS41-202ENST00000310301 SRSF4Q08170 494 aaKnown RBP6.92□□□□□ -1.3
VPS41-202ENST00000310301 LINC00305Q7Z4B0 112 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 G6PC2Q9NQR9 355 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 TCF19Q9Y242 345 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 FOXH1O75593 365 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 GFI1BQ5VTD9 330 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 C1orf162Q8NEQ5 155 aaPredicted RBP6.92□□□□□ -1.3
VPS41-202ENST00000310301 OR5AN1Q8NGI8 311 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 NLRC5Q86WI3 1866 aa6.92□□□□□ -1.3
VPS41-202ENST00000310301 MUC21A0A0G2JKD1 596 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 MUC21A0A140T8X8 626 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 NDUFA2O43678 99 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 IGHV3-48P01763 117 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 MC5RP33032 325 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 MPV17P39210 176 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 MUC21Q5SSG8 566 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 HEPN1Q6WQI6 88 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 OR2K2Q8NGT1 345 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 TMEM14DPA8MWL7 114 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 GPX1P07203 203 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 GPX4P36969 197 aaPredicted RBP6.91□□□□□ -1.3
VPS41-202ENST00000310301 LRTM2Q8N967 370 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 FADS6Q8N9I5 356 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 PAPPA-AS1Q5QFB9 102 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 ZFAND6Q6FIF0 208 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 Q6ZT83 130 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 RPP21Q9H633 154 aaKnown RBP6.91□□□□□ -1.3
VPS41-202ENST00000310301 PPIAL4EA0A075B759 164 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 FOXI3A8MTJ6 420 aaPredicted RBP6.91□□□□□ -1.3
VPS41-202ENST00000310301 PPIAL4FP0DN26 164 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 CACNG7P62955 275 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 SAMD5Q5TGI4 173 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 FAM168AQ92567 244 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 NPIPB3Q92617 1050 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 PPIAL4AQ9Y536 164 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 TRAV12-3A0A0B4J271 114 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 A0A1B0GUT8 65 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 HOXA3O43365 443 aaPredicted RBP6.91□□□□□ -1.3
VPS41-202ENST00000310301 MFAP4P55083 255 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 CCDC144NLQ6NUI1 221 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 SLC25A47Q6Q0C1 308 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 ZNF826PQ6ZT77 177 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 CYSLTR1Q9Y271 337 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 LHFPL6Q9Y693 200 aa6.91□□□□□ -1.3
VPS41-202ENST00000310301 IGHV3OR16-12A0A075B7B8 117 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 SYNGR3O43761 229 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 TNFSF13O75888 250 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 ZNF146Q15072 292 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 ASPHD2Q6ICH7 369 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 DRAM1Q8N682 238 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 LEAP2Q969E1 77 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 SVILO95425 2214 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 PEX7O00628 323 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 MOSP00540 346 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 RRN3P1Q2M238 152 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 RTBDNQ9BSG5 229 aaPredicted RBP6.9□□□□□ -1.3
VPS41-202ENST00000310301 CALYQ9NYX4 217 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 PI4KAP42356 2102 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 TICRRQ7Z2Z1 1910 aa6.9□□□□□ -1.3
VPS41-202ENST00000310301 ASCC3Q8N3C0 2202 aaKnown RBP6.9□□□□□ -1.3
VPS41-202ENST00000310301 TRAV24A0A0B4J272 114 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms