RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CCL17Q92583 94 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 FLYWCH2Q96CP2 140 aaKnown RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 EXPH5Q8NEV8 1989 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 TMEM265A0A087WTH1 108 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 RPL24P83731 157 aaKnown RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 ACSF3Q4G176 576 aaPredicted RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 KRTCAP3Q53RY4 240 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 SPRNQ5BIV9 151 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF324BQ6AW86 544 aaPredicted RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 LSM10Q969L4 123 aaKnown RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 RAB37Q96AX2 223 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 SMIM21Q3B7S5 101 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 OR2V2Q96R30 315 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 GNB4Q9HAV0 340 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 TMEM242Q9NWH2 141 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 SLC45A2Q9UMX9 530 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 GCHFRP30047 84 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 LCN2P80188 198 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 CCL13Q99616 98 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 RNF115Q9Y4L5 304 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 TNRC6AQ8NDV7 1962 aaKnown RBP10.54□□□□□ -0.72
RETREG3-201ENST00000309428 IGHV3-72A0A0B4J1Y9 119 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 MKRN2OSH3BPM6 223 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 K7EM74 188 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 RBFOX2O43251 390 aaKnown RBP eCLIP10.54□□□□□ -0.72
RETREG3-201ENST00000309428 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 STPG3Q8N7X2 389 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 ITLN1Q8WWA0 313 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 SARAFQ96BY9 339 aa10.54□□□□□ -0.72
RETREG3-201ENST00000309428 MLNRO43193 412 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 NUDT3O95989 172 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 PCSK4Q6UW60 755 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 FOXL2NBQ6ZUU3 175 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 ZADH2Q8N4Q0 377 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 NPVFQ9HCQ7 196 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 CLDN14O95500 239 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 IGFBP2P18065 325 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 FOXC1Q12948 553 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 ACTL10Q5JWF8 245 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 Q6ZWC4 215 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 CLEC5AQ9NY25 188 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
RETREG3-201ENST00000309428 NOTCH2Q04721 2471 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 TRAV17A0A0B4J275 112 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 OOEPA6NGQ2 149 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 M0QZ24 198 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 TDGF1P13385 188 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 WDR73Q6P4I2 378 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF841Q6ZN19 808 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF645Q8N7E2 425 aa10.53□□□□□ -0.72
RETREG3-201ENST00000309428 FOXH1O75593 365 aa10.52□□□□□ -0.72
RETREG3-201ENST00000309428 VENTXO95231 258 aa10.52□□□□□ -0.72
RETREG3-201ENST00000309428 FRMD6-AS1P0C7T7 363 aa10.52□□□□□ -0.72
RETREG3-201ENST00000309428 UTF1Q5T230 341 aa10.52□□□□□ -0.72
RETREG3-201ENST00000309428 SEPSECSQ9HD40 501 aaKnown RBP10.52□□□□□ -0.72
RETREG3-201ENST00000309428 IL19Q9UHD0 177 aa10.52□□□□□ -0.72
RETREG3-201ENST00000309428 POLQO75417 2590 aa10.52□□□□□ -0.72
RETREG3-201ENST00000309428 TRAV1-1A0A0B4J248 108 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 NHLH1Q02575 133 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 ZNF585BQ52M93 769 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 LDLRAD2Q5SZI1 272 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 Q8IYB0 196 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 TMEM140Q9NV12 185 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 TNFSF13O75888 250 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 LMO1P25800 156 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 HTR1DP28221 377 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
RETREG3-201ENST00000309428 MRPS11P82912 194 aaKnown RBP10.52□□□□□ -0.73
RETREG3-201ENST00000309428 Q6ZR03 302 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 GMPPAQ96IJ6 420 aaPredicted RBP10.52□□□□□ -0.73
RETREG3-201ENST00000309428 ALKBH7Q9BT30 221 aaPredicted RBP10.52□□□□□ -0.73
RETREG3-201ENST00000309428 ELOVL5Q9NYP7 299 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 IL36BQ9NZH7 164 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
RETREG3-201ENST00000309428 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 PRDX2P32119 198 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 MAJINQ3KP22 176 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 OR8A1Q8NGG7 326 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 OR8B3Q8NGG8 313 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 NEU1Q99519 415 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 J3QR06 171 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 IL6RP08887 468 aaPredicted RBP10.51□□□□□ -0.73
RETREG3-201ENST00000309428 COMPP49747 757 aaPredicted RBP10.51□□□□□ -0.73
RETREG3-201ENST00000309428 MUC21Q5SSG8 566 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 OR1B1Q8NGR6 318 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 PRO3102Q9H379 93 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 ZNF891A8MT65 544 aaPredicted RBP10.51□□□□□ -0.73
RETREG3-201ENST00000309428 SFTPCP11686 197 aa10.51□□□□□ -0.73
RETREG3-201ENST00000309428 DAZAP2Q15038 168 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms