RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 LRRC75BQ2VPJ9 315 aa10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 PVRIGQ6DKI7 326 aa10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 BRD3OSQ6XYD6 125 aa10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 ETV3LQ6ZN32 361 aa10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 GNPNAT1Q96EK6 184 aaPredicted RBP10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 TMEM147Q9BVK8 224 aa10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 HINT2Q9BX68 163 aa10.22□□□□□ -0.77
SHANK2-AS3-201ENST00000307548 FCN1O00602 326 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CA2P00918 260 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OPN1MWP04001 364 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 NMBP08949 121 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OPN1MW2P0DN77 364 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OPN1MW3P0DN78 364 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 RNASE2P10153 161 aaKnown RBP10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FOSL1P15407 271 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 MDKP21741 143 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CD24P25063 80 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 DLK1P80370 383 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 WT1-ASQ06250 92 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OR8G2PQ6IF36 304 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 ZNF562Q6V9R5 426 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 LILRB2Q8N423 598 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 ZNF114Q8NC26 417 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OR10W1Q8NGF6 305 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 RNF141Q8WVD5 230 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TMED6Q8WW62 240 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SMR3AQ99954 134 aa10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SOX21Q9Y651 276 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 A0A0U1RQK1 487 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 IGLC7A0M8Q6 106 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SNCAP37840 140 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SULT1A2P50226 295 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 PLGLAQ15195 96 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TNXAQ16473 311 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FBLN7Q53RD9 439 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 C10orf55Q5SWW7 151 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FAM120AOSQ5T036 256 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 C9orf139Q6ZV77 190 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CENPVQ7Z7K6 275 aaPredicted RBP10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 NANPQ8TBE9 248 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 WDR61Q9GZS3 305 aaKnown RBP10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 UQCC1Q9NVA1 299 aa10.2□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SVEP1Q4LDE5 3571 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TEX22C9J3V5 150 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 LY6G6DO95868 133 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 IFNA4P05014 189 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FBP1P09467 338 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CD99P14209 185 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 ATP6V0CP27449 155 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 RAB5CP51148 216 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 Q8N9W7 124 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SRSF12Q8WXF0 261 aaKnown RBP10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SAT2Q96F10 170 aaPredicted RBP10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 PSMG3Q9BT73 122 aaPredicted RBP10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FAM96BQ9Y3D0 163 aa10.19□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FBXO24O75426 580 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OR13C7P0DN81 318 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 GPX4P36969 197 aaPredicted RBP10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 HSD17B11Q8NBQ5 300 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CACNG8Q8WXS5 425 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TAF15Q92804 592 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 YAE1D1Q9NRH1 226 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TMEM160Q9NX00 188 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TIMM9Q9Y5J7 89 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 UMAD1C9J7I0 102 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TRIM77I1YAP6 450 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 MPDU1O75352 247 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 HLA-DRB1P01911 266 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FXYD3Q14802 87 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 FAM74A1Q5RGS3 127 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 BCL6BQ8N143 479 aaPredicted RBP10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 RBM14Q96PK6 669 aaKnown RBP10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 P2RX4Q99571 388 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 WDR83OSQ9Y284 106 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 NF1P21359 2839 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 PLXNB1O43157 2135 aa10.18□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 NCBP2LA6PVI3 153 aaKnown RBP10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TSPAN9O75954 239 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CNIH1O95406 144 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 CX3CL1P78423 397 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SERF2P84101 59 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SLC25A24Q6NUK1 477 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OR1P1Q8NH06 330 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SSX3Q99909 188 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SH3BGRL3Q9H299 93 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 NPVFQ9HCQ7 196 aa10.17□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 SOX15O60248 233 aa10.16□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 GNB1P62873 340 aa10.16□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 IL17RELQ6ZVW7 336 aa10.16□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 OR2G3Q8NGZ4 309 aa10.16□□□□□ -0.78
SHANK2-AS3-201ENST00000307548 RASL11BQ9BPW5 248 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms