RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 IL4P05112 153 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 AGAP20933 346 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 MBNL2Q5VZF2 373 aaKnown RBP7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TCF23Q7RTU1 214 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 REPIN1Q9BWE0 567 aaKnown RBP7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 IGHG3P01860 377 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 SPINK2P20155 84 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 FUT5Q11128 374 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TMEM136Q6ZRR5 245 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 FBLL1A6NHQ2 334 aaKnown RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 LEPROTL1O95214 131 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 PLP1P60201 277 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 GAGE10A6NGK3 116 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 EFNA4P52798 201 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TLNRD1Q9H1K6 362 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TRBV5-5A0A0J9YX44 114 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 J3QKU1 62 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 OR2H2O95918 312 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 VN1R17PQ8TDU5 208 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 ALX4Q9H161 411 aaPredicted RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 OR51M1Q9H341 326 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 FAM206AQ9NX38 181 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 IL6RP08887 468 aaPredicted RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 HSPE1P61604 102 aaKnown RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 ZNF880Q6PDB4 577 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 LRTM2Q8N967 370 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 OR4D5Q8NGN0 318 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 SLIRPQ9GZT3 109 aaKnown RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 C8orf88P0DMB2 117 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 AWAT1Q58HT5 328 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TMEM42Q69YG0 159 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 RGP1Q92546 391 aaPredicted RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 RPRMQ9NS64 109 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TCRBV4S1A1TA0A5B7 111 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 CYB5R3P00387 301 aaPredicted RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 RFPL3SP0C7P2 107 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 EML5Q05BV3 1969 aa7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 TNRC6AQ8NDV7 1962 aaKnown RBP7.06□□□□□ -1.28
PCDHB1-201ENST00000306549 A0A1W2PRX2 142 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 AMY1AP04745 511 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 ZNF146Q15072 292 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 SLC25A28Q96A46 364 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 IL36RNQ9UBH0 155 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 A0A087X0M5 115 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 A0A1B0GX30 115 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 MED19A0JLT2 244 aaPredicted RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 EREGO14944 169 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 ZNF25P17030 456 aaPredicted RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 LINC00114Q6XXX2 140 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 OSR1Q8TAX0 266 aaPredicted RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 SRSF12Q8WXF0 261 aaKnown RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 OR11H12B2RN74 326 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 CYB5R2Q6BCY4 276 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 POC1AQ8NBT0 407 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 OR11H1Q8NG94 326 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 PGLYRP4Q96LB8 373 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 NRTNQ99748 197 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 PRO1933Q9H354 126 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 IFT22Q9H7X7 185 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 PAM16Q9Y3D7 125 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 COL5A1P20908 1838 aaPredicted RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 DUSP14O95147 198 aaKnown RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 IGHV1-2P23083 117 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 PSMG4Q5JS54 123 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 MARVELD1Q9BSK0 173 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 DLL3Q9NYJ7 618 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 IGHV3OR16-10A0A075B7F0 116 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 HOXA5P20719 270 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 LEPP41159 167 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 IRF3Q14653 427 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 KLK15Q9H2R5 256 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 NPIPB7O75200 414 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 HLA-DRB1P01911 266 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 ERVK11-1P61568 191 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 LY6DQ14210 128 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 DEFB121Q5J5C9 76 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 LDLRAD2Q5SZI1 272 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 LYZL2Q7Z4W2 148 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 B4DSR2 109 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 THBDP07204 575 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 BCL2P10415 239 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 TMEM86BQ8N661 226 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 C9orf106Q8NAJ2 232 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 LINC01560Q8TB33 94 aa7.05□□□□□ -1.28
PCDHB1-201ENST00000306549 FOXI3A8MTJ6 420 aaPredicted RBP7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 NPBWR2P48146 333 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 TMEM167AQ8TBQ9 72 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 C4orf51C9J302 202 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 H3BQ15 152 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 RPS11P62280 158 aaKnown RBP eCLIP7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 ACP7Q6ZNF0 438 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 AICDAQ9GZX7 198 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 BEX4Q9NWD9 120 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms