RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 FOXF2Q12947 444 aa11.09□□□□□ -0.63
DDX54-201ENST00000306014 HIGD1AQ9Y241 93 aa11.09□□□□□ -0.63
DDX54-201ENST00000306014 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 OR2J3O76001 311 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 OR4A8P0C604 315 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 FAM216BQ8N7L0 139 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 PCNX3Q9H6A9 2034 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 IL18BPO95998 194 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 MOSP00540 346 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 MORN2Q502X0 79 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 PEAR1Q5VY43 1037 aaPredicted RBP11.08□□□□□ -0.64
DDX54-201ENST00000306014 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 GBGT1Q8N5D6 347 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
DDX54-201ENST00000306014 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
DDX54-201ENST00000306014 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 PPIHO43447 177 aaKnown RBP11.08□□□□□ -0.64
DDX54-201ENST00000306014 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 RBM14Q96PK6 669 aaKnown RBP11.08□□□□□ -0.64
DDX54-201ENST00000306014 RNF115Q9Y4L5 304 aa11.08□□□□□ -0.64
DDX54-201ENST00000306014 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 GZMBP10144 247 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 MMDQ15546 238 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 EFNB3Q15768 340 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 EAF1Q96JC9 268 aaPredicted RBP11.07□□□□□ -0.64
DDX54-201ENST00000306014 OR8B2Q96RD0 313 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 C19orf24Q9BVV8 132 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 PROK2Q9HC23 129 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 IGLV3-1P01715 115 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 RELBQ01201 579 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 Q6P435 159 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 FOXI3A8MTJ6 420 aaPredicted RBP11.07□□□□□ -0.64
DDX54-201ENST00000306014 IFI27L2Q9H2X8 130 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 PRSS1P07477 247 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 OR4C13Q8NGP0 309 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 MIEN1Q9BRT3 115 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
DDX54-201ENST00000306014 NUP210Q8TEM1 1887 aaPredicted RBP11.06□□□□□ -0.64
DDX54-201ENST00000306014 TRBV6-6A0A0A6YYG2 114 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 FAM90A27PA6NNH2 459 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 CORTO00230 105 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 TIMP3P35625 211 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 BPIFA4PQ86YQ2 179 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 GGTLC1Q9BX51 225 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 LTBP2Q14767 1821 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 KIAA1549LQ6ZVL6 1849 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
DDX54-201ENST00000306014 NEU1Q99519 415 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 KBTBD11-OT1A0A1B0GTJ5 212 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 PPOXP50336 477 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 ZNF124Q15973 351 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 LINC00305Q7Z4B0 112 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 C9orf106Q8NAJ2 232 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
DDX54-201ENST00000306014 SPRR3Q9UBC9 169 aa11.06□□□□□ -0.64
DDX54-201ENST00000306014 INTS1Q8N201 2190 aaKnown RBP11.05□□□□□ -0.64
DDX54-201ENST00000306014 LINC00473A8K010 186 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 ORM1P02763 201 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 GLRXP35754 106 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
DDX54-201ENST00000306014 SPATA31B1PQ5VZV4 182 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 COLCA1Q6ZS62 124 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 THYN1Q9P016 225 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 YPEL1O60688 119 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 CD59P13987 128 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 MC5RP33032 325 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 COTL1Q14019 142 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 C1orf185Q5T7R7 199 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 YPEL2Q96QA6 119 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 SEPSECSQ9HD40 501 aaKnown RBP11.05□□□□□ -0.64
DDX54-201ENST00000306014 CRIM1Q9NZV1 1036 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 C15orf61A6NNL5 157 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 RBFOX2O43251 390 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX54-201ENST00000306014 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 CA1P00915 261 aaPredicted RBP11.05□□□□□ -0.64
DDX54-201ENST00000306014 GTF2H5Q6ZYL4 71 aa11.05□□□□□ -0.64
DDX54-201ENST00000306014 FREM1Q5H8C1 2179 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 CD3EP07766 207 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
DDX54-201ENST00000306014 ASCL5Q7RTU5 278 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 ST6GALNAC3Q8NDV1 305 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 USF3Q68DE3 2245 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 TRAV3A0A0B4J244 114 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 PFN1P07737 140 aaKnown RBP11.04□□□□□ -0.64
DDX54-201ENST00000306014 SELLP14151 372 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 FOXL1Q12952 345 aa11.04□□□□□ -0.64
DDX54-201ENST00000306014 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms