RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 C1orf162Q8NEQ5 155 aaPredicted RBP12.79□□□□□ -0.36
CHAF1A-201ENST00000301280 MYO9AB2RTY4 2548 aa12.79□□□□□ -0.36
CHAF1A-201ENST00000301280 C17orf58Q2M2W7 97 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 SGMS2Q8NHU3 365 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 MGST2Q99735 147 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 MBD3L4A6NDZ8 208 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 MBD3L3A6NE82 208 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 MBD3L5A6NJ08 208 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 AMBPP02760 352 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 CCKARP32238 428 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 LOXL3P58215 753 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 LEMD1Q68G75 181 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 ZNF664Q8N3J9 261 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 MBD3L2Q8NHZ7 208 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 ABCA12Q86UK0 2595 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 MOSP00540 346 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 NPPCP23582 126 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 SPCS3P61009 180 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 RELBQ01201 579 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 AARDQ4LEZ3 155 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
CHAF1A-201ENST00000301280 IGHV3OR16-8A0A075B7F1 116 aa12.77□□□□□ -0.36
CHAF1A-201ENST00000301280 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.36
CHAF1A-201ENST00000301280 MDFIC2A0A1B0GVS7 189 aa12.77□□□□□ -0.36
CHAF1A-201ENST00000301280 GFRA3O60609 400 aa12.77□□□□□ -0.36
CHAF1A-201ENST00000301280 CRYBB3P26998 211 aa12.77□□□□□ -0.36
CHAF1A-201ENST00000301280 Q6ZS92 163 aa12.77□□□□□ -0.36
CHAF1A-201ENST00000301280 IGHV3-35A0A0C4DH35 117 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 NKX6-3A6NJ46 265 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 F6UZH7 168 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 IL6RP08887 468 aaPredicted RBP12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 PKIAP61925 76 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 RAB31Q13636 194 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 RTL8BQ17RB0 113 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 ARSJQ5FYB0 599 aaPredicted RBP12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 MBNL2Q5VZF2 373 aaKnown RBP12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 TPSG1Q9NRR2 321 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 JPT1Q9UK76 154 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 PPIAL4EA0A075B759 164 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 PPIAL4DF5H284 164 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 NDUFB3O43676 98 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 PPIAL4FP0DN26 164 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 ZNF90Q03938 601 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 HES1Q14469 280 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 ADIPOQQ15848 244 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 GAFA1Q96PS6 74 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 SSBP3Q9BWW4 388 aaPredicted RBP12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 PPIAL4AQ9Y536 164 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 TIMM9Q9Y5J7 89 aa12.77□□□□□ -0.37
CHAF1A-201ENST00000301280 hADV38S2A0JD32 116 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 E7EUB6 86 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 DSCAML1Q8TD84 2053 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 CRYBG3Q68DQ2 2970 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 TRBV24-1A0A075B6N3 115 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 TNFRSF1AP19438 455 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 LPAR2Q9HBW0 351 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
CHAF1A-201ENST00000301280 KBTBD11O94819 623 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 RPP30P78346 268 aaKnown RBP12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 SPACA3Q8IXA5 215 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 TCTEX1D1Q8N7M0 179 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 FAM57AQ8TBR7 257 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 ZCCHC14Q8WYQ9 949 aaKnown RBP12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 GGTLC1Q9BX51 225 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 IDI2-AS1Q9NZ38 188 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 PMS2P5A8MQ11 134 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 A8MWP6 167 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 APOA2P02652 100 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 PFN1P07737 140 aaKnown RBP12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 HSPE1P61604 102 aaKnown RBP12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 TNXAQ16473 311 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 VWC2Q2TAL6 325 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 OR2T10Q8NGZ9 312 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 RITA1Q96K30 269 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 HRASP01112 189 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 CBLN1P23435 193 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 CNTFRP26992 372 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 MRPL54Q6P161 138 aaKnown RBP12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 NPIPB3Q92617 1050 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 NPVFQ9HCQ7 196 aa12.75□□□□□ -0.37
CHAF1A-201ENST00000301280 B4DEV8 164 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 SCGB1D1O95968 90 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms