RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 HILPDAQ9Y5L2 63 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 PRNTQ86SH4 94 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 PRSS3P2Q8NHM4 247 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 CCDC168Q8NDH2 2452 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 GCGP01275 180 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 PYYP10082 97 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 SRP14P37108 136 aaKnown RBP11.09□□□□□ -0.63
CASC4-201ENST00000299957 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
CASC4-201ENST00000299957 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
CASC4-201ENST00000299957 IGHV3OR16-13A0A075B7E8 117 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 IGHV3-74A0A0B4J1X5 117 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 NTN3O00634 580 aaPredicted RBP11.08□□□□□ -0.64
CASC4-201ENST00000299957 CD24P25063 80 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 TIMP3P35625 211 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 KLHDC1Q8N7A1 406 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 PRNDQ9UKY0 176 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 TECTAO75443 2155 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
CASC4-201ENST00000299957 DLX1P56177 255 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 CLEC5AQ9NY25 188 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.64
CASC4-201ENST00000299957 NUP210Q8TEM1 1887 aaPredicted RBP11.08□□□□□ -0.64
CASC4-201ENST00000299957 MKRN2OSH3BPM6 223 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 GNG5P63218 68 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 SLC35E4Q6ICL7 350 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 ASCL2Q99929 193 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 SEMA5BQ9P283 1151 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 TBL2Q9Y4P3 447 aaKnown RBP11.08□□□□□ -0.64
CASC4-201ENST00000299957 AMMECR1Q9Y4X0 333 aaPredicted RBP11.08□□□□□ -0.64
CASC4-201ENST00000299957 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
CASC4-201ENST00000299957 P01737 135 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 AARDQ4LEZ3 155 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 COQ2Q96H96 371 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 LPAR2Q9HBW0 351 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 RNF115Q9Y4L5 304 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 OR2J3O76001 311 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 IGHV2-5P01817 119 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 TNFSF10P50591 281 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
CASC4-201ENST00000299957 FOXC1Q12948 553 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 MBD3L1Q8WWY6 194 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 NGBQ9NPG2 151 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 INSIG2Q9Y5U4 225 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 IGHV2OR16-5A0A0B4J2B6 119 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 MLNRO43193 412 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 SIAH2O43255 324 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 OR5AL1P0C617 328 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 JOSD1Q15040 202 aaPredicted RBP11.07□□□□□ -0.64
CASC4-201ENST00000299957 TCTEX1D1Q8N7M0 179 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 GAL3ST2Q9H3Q3 398 aa11.07□□□□□ -0.64
CASC4-201ENST00000299957 FBLL1A6NHQ2 334 aaKnown RBP11.06□□□□□ -0.64
CASC4-201ENST00000299957 PPIHO43447 177 aaKnown RBP11.06□□□□□ -0.64
CASC4-201ENST00000299957 NHLH1Q02575 133 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 Q6P435 159 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 FA2HQ7L5A8 372 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 WDR86Q86TI4 376 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 OR8A1Q8NGG7 326 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 HSPB7Q9UBY9 170 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 FRYLO94915 3013 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 NBEAQ8NFP9 2946 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 LYNX1G3V0Z9 82 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 CLEC3BP05452 202 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 FTH1P19P0C7X4 201 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
CASC4-201ENST00000299957 LYNX1P0DP58 116 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 GZMBP10144 247 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 SPSB4Q96A44 273 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 CGB1A6NKQ9 187 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 PRR33A8MZF0 331 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 RBFOX2O43251 390 aaKnown RBP eCLIP11.06□□□□□ -0.64
CASC4-201ENST00000299957 DUTP33316 252 aaKnown RBP11.06□□□□□ -0.64
CASC4-201ENST00000299957 ACSF3Q4G176 576 aaPredicted RBP11.06□□□□□ -0.64
CASC4-201ENST00000299957 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 MCRIP2Q9BUT9 160 aaKnown RBP11.06□□□□□ -0.64
CASC4-201ENST00000299957 DCAF16Q9NXF7 216 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 SORL1Q92673 2214 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 TANC2Q9HCD6 1990 aa11.06□□□□□ -0.64
CASC4-201ENST00000299957 FOXI3A8MTJ6 420 aaPredicted RBP11.05□□□□□ -0.64
CASC4-201ENST00000299957 PMCHL1Q16048 86 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 TRANK1O15050 2925 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 ETV2O00321 342 aaPredicted RBP11.05□□□□□ -0.64
CASC4-201ENST00000299957 EREGO14944 169 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 WISP2O76076 250 aa11.05□□□□□ -0.64
CASC4-201ENST00000299957 IGHV2-70P01814 119 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms