RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 RRNAD1Q96FB5 475 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 RCC1LQ96I51 464 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 OR4C12Q96R67 309 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 PHB2Q99623 299 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 RBKSQ9H477 322 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 GPN1Q9HCN4 374 aaPredicted RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 GSKIPQ9P0R6 139 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 FOXA2Q9Y261 457 aaPredicted RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 KCNIP3Q9Y2W7 256 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 LSM5Q9Y4Y9 91 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 DMRT1Q9Y5R6 373 aa5.08□□□□□ -1.6
DEPDC4-201ENST00000299185 TRAV14DV4A0A0A6YYC5 116 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 TRAV41A0A0B4J266 112 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 A0A1W2PN81 502 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 A0A1W2PRX2 142 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 CEBPZOSA8MTT3 80 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 SNRPGP15A8MWD9 76 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 PITX3O75364 302 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 SNAPC5O75971 98 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 TMEM50AO95807 157 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 IGHV3-48P01763 117 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 IGHV3-23P01764 117 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 IGHG2P01859 326 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 MBPP02686 304 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 CD28P10747 220 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 VDAC1P21796 283 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 CHRNA7P36544 502 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 BCAP31P51572 246 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 RRAS2P62070 204 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 CFHR3Q02985 330 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 TMEM267Q0VDI3 215 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 TCTEX1D4Q5JR98 221 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 C16orf82Q7Z2V1 217 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 CADM3Q8N126 398 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 Q8N2B8 174 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 STPG2Q8N412 459 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 OR8H1Q8NGG4 311 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 OR4D5Q8NGN0 318 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 LINC01006Q8NI28 216 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 TMEM170AQ8WVE7 144 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 LSM10Q969L4 123 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 BSCL2Q96G97 398 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 MS4A10Q96PG2 267 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 OR5B12Q96R08 314 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 JMJD8Q96S16 334 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 PRSS22Q9GZN4 317 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 COMMD5Q9GZQ3 224 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 MED28Q9H204 178 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 KLK15Q9H2R5 256 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 FAM212BQ9NTI7 297 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 TMEM14BQ9NUH8 114 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 COA4Q9NYJ1 87 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 PRNDQ9UKY0 176 aa5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 PAIP2BQ9ULR5 123 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-201ENST00000299185 G3V3Q6 166 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 H0YIZ8 118 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 K7EPK0 472 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 WRBO00258 174 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 B3GALNT1O75752 331 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 OR2J3O76001 311 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 ACTL6BO94805 426 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 NDUFA7O95182 113 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 IFNA17P01571 189 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 IGHV3-11P01762 117 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 CRYBA1P05813 215 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 TRAPPC2P0DI81 140 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 TRAPPC2BP0DI82 140 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 OR13C7P0DN81 318 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 HKR1P10072 659 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 PRCDQ00LT1 54 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 CD83Q01151 205 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 TNFRSF9Q07011 255 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 RAB32Q13637 225 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 AWAT1Q58HT5 328 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 HAPLN4Q86UW8 402 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 OR1L8Q8NGR8 309 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 OR4A5Q8NH83 315 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 OR2T6Q8NHC8 308 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 VSTM2AQ8TAG5 236 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 DUX3Q96PT4 197 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 RNF5Q99942 180 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 PDCD10Q9BUL8 212 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 PLEKHA3Q9HB20 300 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 RAB18Q9NP72 206 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 NDUFA4L2Q9NRX3 87 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 OR5AC2Q9NZP5 309 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 MRPL36Q9P0J6 103 aaKnown RBP5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 TMED3Q9Y3Q3 217 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 TNCP24821 2201 aa5.06□□□□□ -1.6
DEPDC4-201ENST00000299185 A0A1B0GU03 582 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 DUXBA0A1W2PPF3 345 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 IGSF23A1L1A6 192 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 PSMB11A5LHX3 300 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 MFSD2BA6NFX1 497 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 C15orf62A8K5M9 175 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 M0QZK8 103 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 AP4M1O00189 453 aa5.05□□□□□ -1.6
DEPDC4-201ENST00000299185 TSPAN9O75954 239 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms