RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FAM106CPP0CH98 169 aa16.62■□□□□ 0.25
SMCO4-201ENST00000298966 RPL8P62917 257 aaKnown RBP16.62■□□□□ 0.25
SMCO4-201ENST00000298966 MMD2Q8IY49 270 aa16.62■□□□□ 0.25
SMCO4-201ENST00000298966 VKORC1L1Q8N0U8 176 aa16.62■□□□□ 0.25
SMCO4-201ENST00000298966 OR2C3Q8N628 320 aa16.62■□□□□ 0.25
SMCO4-201ENST00000298966 CITED2Q99967 270 aaPredicted RBP16.62■□□□□ 0.25
SMCO4-201ENST00000298966 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 ADARB2-AS1A8MUL3 147 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 IFNA17P01571 189 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 RPP30P78346 268 aaKnown RBP16.61■□□□□ 0.25
SMCO4-201ENST00000298966 BAXQ07812 192 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 MRPL41Q8IXM3 137 aaKnown RBP16.61■□□□□ 0.25
SMCO4-201ENST00000298966 WFDC9Q8NEX5 89 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 NPBQ8NG41 125 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 ZNF702PQ9H963 129 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 SERTAD4Q9NUC0 356 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 KIAA1456Q9P272 454 aa16.61■□□□□ 0.25
SMCO4-201ENST00000298966 PAIP2BQ9ULR5 123 aaKnown RBP16.61■□□□□ 0.25
SMCO4-201ENST00000298966 IFNA7P01567 189 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 IGKV1D-33P01593 117 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 IGKV1-33P01594 117 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 PAX9P55771 341 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 ATP5IP56385 69 aaPredicted RBP16.6■□□□□ 0.25
SMCO4-201ENST00000298966 ZNF680Q8NEM1 530 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 STOML3Q8TAV4 291 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 DTD1Q8TEA8 209 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 AJUBAQ96IF1 538 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 EAF1Q96JC9 268 aaPredicted RBP16.6■□□□□ 0.25
SMCO4-201ENST00000298966 QTRT1Q9BXR0 403 aaKnown RBP16.6■□□□□ 0.25
SMCO4-201ENST00000298966 COMMD5Q9GZQ3 224 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 RBKSQ9H477 322 aa16.6■□□□□ 0.25
SMCO4-201ENST00000298966 CEBPZOSA8MTT3 80 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 NBR2O15453 112 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 NDUFA3O95167 84 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 TMEM50AO95807 157 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 CRYGBP07316 175 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 CD69Q07108 199 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 PSG5Q15238 335 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 OR1L8Q8NGR8 309 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 HIPK2Q9H2X6 1198 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 ENY2Q9NPA8 101 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 TCF19Q9Y242 345 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 OR51B2Q9Y5P1 312 aa16.59■□□□□ 0.25
SMCO4-201ENST00000298966 INS-IGF2F8WCM5 200 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 RRHO14718 337 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 SLC25A17O43808 307 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 NXPH3O95157 252 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 SNRNP70P08621 437 aaKnown RBP16.58■□□□□ 0.24
SMCO4-201ENST00000298966 PAX6P26367 422 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 CAV2P51636 162 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 OR2B8PP59922 312 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 PRCDQ00LT1 54 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 EWSR1Q01844 656 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMCO4-201ENST00000298966 STX12Q86Y82 276 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 DYNAPQ8N1N2 210 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 Q8N6K4 173 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 TMEM252Q8N6L7 170 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 ZNF471Q9BX82 626 aaPredicted RBP16.58■□□□□ 0.24
SMCO4-201ENST00000298966 CYTL1Q9NRR1 136 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 PSENENQ9NZ42 101 aa16.58■□□□□ 0.24
SMCO4-201ENST00000298966 TRAV3A0A0B4J244 114 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 A0A1W2PN81 502 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 IGSF23A1L1A6 192 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 ACTL6BO94805 426 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 CHRNA7P36544 502 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 EIF5AP63241 154 aaKnown RBP16.57■□□□□ 0.24
SMCO4-201ENST00000298966 HES1Q14469 280 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 HSD17B13Q7Z5P4 300 aaPredicted RBP16.57■□□□□ 0.24
SMCO4-201ENST00000298966 PPP1R27Q86WC6 154 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 Q8N2B8 174 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 ST8SIA2Q92186 375 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 PHYHIPLQ96FC7 376 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 METTL1Q9UBP6 276 aaKnown RBP16.57■□□□□ 0.24
SMCO4-201ENST00000298966 FBXL17Q9UF56 701 aa16.57■□□□□ 0.24
SMCO4-201ENST00000298966 WI2-2373I1.2A0A1W2PRP0 233 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 FAM24AA6NFZ4 105 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 CFDP00746 253 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-201ENST00000298966 PF4V1P10720 104 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 TPT1P13693 172 aaKnown RBP16.56■□□□□ 0.24
SMCO4-201ENST00000298966 TMEM11P17152 192 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 F2RL1P55085 397 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 EXOSC2Q13868 293 aaKnown RBP16.56■□□□□ 0.24
SMCO4-201ENST00000298966 MMDQ15546 238 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 PRSS8Q16651 343 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 ARSJQ5FYB0 599 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-201ENST00000298966 PIFOQ8TCI5 191 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 WIPF2Q8TF74 440 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-201ENST00000298966 SRSF8Q9BRL6 282 aaKnown RBP16.56■□□□□ 0.24
SMCO4-201ENST00000298966 PRSS22Q9GZN4 317 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 PLEKHA3Q9HB20 300 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 UBQLN2Q9UHD9 624 aa16.56■□□□□ 0.24
SMCO4-201ENST00000298966 TNCP24821 2201 aa16.55■□□□□ 0.24
SMCO4-201ENST00000298966 IAPPP10997 89 aa16.55■□□□□ 0.24
SMCO4-201ENST00000298966 HOXA1P49639 335 aaPredicted RBP16.55■□□□□ 0.24
SMCO4-201ENST00000298966 STPG2Q8N412 459 aa16.55■□□□□ 0.24
SMCO4-201ENST00000298966 ZNF430Q9H8G1 570 aaPredicted RBP16.55■□□□□ 0.24
SMCO4-201ENST00000298966 STRAPQ9Y3F4 350 aaKnown RBP16.55■□□□□ 0.24
SMCO4-201ENST00000298966 TEX50A0A1B0GTY4 177 aa16.54■□□□□ 0.24
SMCO4-201ENST00000298966 A0A1W2PRX2 142 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms