RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 ACOT6Q3I5F7 207 aaPredicted RBP18.26■□□□□ 0.51
VSTM4-201ENST00000298454 FAM74A3Q4VXF1 159 aa18.26■□□□□ 0.51
VSTM4-201ENST00000298454 ACTR3CQ9C0K3 210 aaPredicted RBP18.26■□□□□ 0.51
VSTM4-201ENST00000298454 SIRPDQ9H106 197 aa18.26■□□□□ 0.51
VSTM4-201ENST00000298454 PXMP4Q9Y6I8 212 aa18.26■□□□□ 0.51
VSTM4-201ENST00000298454 IGHV2-70DA0A0C4DH43 119 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 CTXND1A0A1B0GTU2 59 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 DNASE2O00115 360 aaPredicted RBP18.25■□□□□ 0.51
VSTM4-201ENST00000298454 YIF1AO95070 293 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 VENTXO95231 258 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 HOXB4P17483 251 aaPredicted RBP18.25■□□□□ 0.51
VSTM4-201ENST00000298454 CEACAM3P40198 252 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 TNXAQ16473 311 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 MMD2Q8IY49 270 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 SSMEM1Q8WWF3 244 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 UNKLQ9H9P5 680 aaKnown RBP18.25■□□□□ 0.51
VSTM4-201ENST00000298454 LOC102723971A0A1B0GUV8 181 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 SRP19P09132 144 aaKnown RBP18.25■□□□□ 0.51
VSTM4-201ENST00000298454 CFHR4Q92496 578 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 RAB24Q969Q5 203 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 FBXL15Q9H469 300 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 MYO18BQ8IUG5 2567 aa18.25■□□□□ 0.51
VSTM4-201ENST00000298454 REG1AP05451 166 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 CD24P25063 80 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 SRSF1Q07955 248 aaKnown RBP eCLIP18.24■□□□□ 0.51
VSTM4-201ENST00000298454 PPP1R27Q86WC6 154 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 TMPRSS5Q9H3S3 457 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 CYB5BO43169 146 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 ACTL6BO94805 426 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 GNB1P62873 340 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 KHDC3LQ587J8 217 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 P2RX4Q99571 388 aa18.24■□□□□ 0.51
VSTM4-201ENST00000298454 FNDC10F2Z333 226 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 HSPB1P04792 205 aaKnown RBP18.23■□□□□ 0.51
VSTM4-201ENST00000298454 BCL2P10415 239 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 CEBPGP53567 150 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 GAMTQ14353 236 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 SSX2Q16385 188 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 CLRN3Q8NCR9 226 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 EPG5Q9HCE0 2579 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 RPL27AP46776 148 aaKnown RBP18.23■□□□□ 0.51
VSTM4-201ENST00000298454 CDC34P49427 236 aaPredicted RBP18.23■□□□□ 0.51
VSTM4-201ENST00000298454 CD69Q07108 199 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 TMEM88Q6PEY1 159 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 DYNAPQ8N1N2 210 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 C17orf50Q8WW18 174 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 LPAR2Q9HBW0 351 aa18.23■□□□□ 0.51
VSTM4-201ENST00000298454 UTP20O75691 2785 aaKnown RBP18.22■□□□□ 0.51
VSTM4-201ENST00000298454 IGKV1OR2-108A0A075B7D4 117 aa18.22■□□□□ 0.51
VSTM4-201ENST00000298454 IGLC7A0M8Q6 106 aa18.22■□□□□ 0.51
VSTM4-201ENST00000298454 APELAP0DMC3 54 aa18.22■□□□□ 0.51
VSTM4-201ENST00000298454 FBLN7Q53RD9 439 aa18.22■□□□□ 0.51
VSTM4-201ENST00000298454 RNF5Q99942 180 aa18.22■□□□□ 0.51
VSTM4-201ENST00000298454 SVEP1Q4LDE5 3571 aa18.22■□□□□ 0.51
VSTM4-201ENST00000298454 FCN1O00602 326 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 TOX4O94842 621 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 COMPP49747 757 aaPredicted RBP18.21■□□□□ 0.51
VSTM4-201ENST00000298454 B2MP61769 119 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 HABP2Q14520 560 aaPredicted RBP18.21■□□□□ 0.51
VSTM4-201ENST00000298454 SOHLH1Q5JUK2 328 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 TMEM144Q7Z5S9 345 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 CYB561D1Q8N8Q1 229 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 VPS13CQ709C8 3753 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 MED13LQ71F56 2210 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 SEC14L6B5MCN3 397 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 SOX15O60248 233 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 STPG3Q8N7X2 389 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 FAM168AQ92567 244 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 TBX15Q96SF7 602 aa18.21■□□□□ 0.51
VSTM4-201ENST00000298454 PLXNB1O43157 2135 aa18.21■□□□□ 0.5
VSTM4-201ENST00000298454 AREGP15514 252 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 SSBP2P81877 361 aaPredicted RBP18.2■□□□□ 0.5
VSTM4-201ENST00000298454 RAB31Q13636 194 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 MMDQ15546 238 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 AKIRIN2Q53H80 203 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 CBLN2Q8IUK8 224 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 OR2T6Q8NHC8 308 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 MAS1LP35410 378 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 PLGLAQ15195 96 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 C19orf35Q6ZS72 473 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 SLC16A13Q7RTY0 426 aa18.2■□□□□ 0.5
VSTM4-201ENST00000298454 FNDC4Q9H6D8 234 aaPredicted RBP18.2■□□□□ 0.5
VSTM4-201ENST00000298454 TSPAN4O14817 238 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 FOXH1O75593 365 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 RPL29P47914 159 aaKnown RBP18.19■□□□□ 0.5
VSTM4-201ENST00000298454 SUB1P53999 127 aaKnown RBP eCLIP18.19■□□□□ 0.5
VSTM4-201ENST00000298454 ATP5J2P56134 94 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 IQCF2Q8IXL9 164 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 NRGNQ92686 78 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 PIMREGQ9BSJ6 248 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 C20orf24Q9BUV8 137 aa18.19■□□□□ 0.5
VSTM4-201ENST00000298454 A0A1W2PPV4 95 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 MOSP00540 346 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 LGALS4P56470 323 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 PRR20EP86478 221 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 PRR20CP86479 221 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 PRR20DP86480 221 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 PRR20BP86481 221 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 PRR20AP86496 221 aa18.18■□□□□ 0.5
VSTM4-201ENST00000298454 RNASEH2CQ8TDP1 164 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms