RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 SSX3Q99909 188 aa14.73□□□□□ -0.05
SEC61A2-201ENST00000298428 ZNF469Q96JG9 3925 aaPredicted RBP14.73□□□□□ -0.05
SEC61A2-201ENST00000298428 TEX22C9J3V5 150 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 SEC11BP0C7V7 166 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 RUNX1Q01196 453 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 LRRC75BQ2VPJ9 315 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 Q8N9W7 124 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 NANPQ8TBE9 248 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 PIFOQ8TCI5 191 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 SCGB1C1Q8TD33 95 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 ITPR3Q14573 2671 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 AKAP9Q99996 3911 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 REG1AP05451 166 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 APELAP0DMC3 54 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 FXYD3Q14802 87 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 VWC2Q2TAL6 325 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 GNPNAT1Q96EK6 184 aaPredicted RBP14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 GGACTQ9BVM4 153 aa14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 PARD6GQ9BYG4 376 aaPredicted RBP14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 WDR61Q9GZS3 305 aaKnown RBP14.72□□□□□ -0.05
SEC61A2-201ENST00000298428 ABCA1O95477 2261 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 NMBP08949 121 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 AREGP15514 252 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 SUB1P53999 127 aaKnown RBP eCLIP14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 NDUFA5Q16718 116 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 ZNF562Q6V9R5 426 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 HSD17B13Q7Z5P4 300 aaPredicted RBP14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 RNF141Q8WVD5 230 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 SSMEM1Q8WWF3 244 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 RASL11BQ9BPW5 248 aa14.71□□□□□ -0.05
SEC61A2-201ENST00000298428 FSHBP01225 129 aa14.7□□□□□ -0.06
SEC61A2-201ENST00000298428 DLK1P80370 383 aa14.7□□□□□ -0.06
SEC61A2-201ENST00000298428 P2RX4Q99571 388 aa14.7□□□□□ -0.06
SEC61A2-201ENST00000298428 SMCO3A2RU48 225 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 CX3CL1P78423 397 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 TMEM219Q86XT9 240 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 OR2G3Q8NGZ4 309 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 ABHD5Q8WTS1 349 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 TAF15Q92804 592 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 RBM14Q96PK6 669 aaKnown RBP14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 SRSF8Q9BRL6 282 aaKnown RBP14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 SLC25A33Q9BSK2 321 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 RFNGQ9Y644 331 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 ZFHX3Q15911 3703 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 H3BUX3 64 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 HLA-DRB1P01911 266 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 FAM157CP0CG43 387 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 ZNF114Q8NC26 417 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 LRRC20Q8TCA0 184 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 ARPC1AQ92747 370 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 FAM103A1Q9BTL3 118 aaKnown RBP14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 RSG1Q9BU20 258 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 PLA2G2EQ9NZK7 142 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 NAV3Q8IVL0 2385 aa14.69□□□□□ -0.06
SEC61A2-201ENST00000298428 MDFIC2A0A1B0GVS7 189 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 FGF7P21781 194 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 SULT1A2P50226 295 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 AANATQ16613 207 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 CSPG4Q6UVK1 2322 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 TMEM182Q6ZP80 229 aaPredicted RBP14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 SLC7A5P1Q8MH63 180 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 BCL6BQ8N143 479 aaPredicted RBP14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 C22orf15Q8WYQ4 148 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 MOB4Q9Y3A3 225 aa14.68□□□□□ -0.06
SEC61A2-201ENST00000298428 NDPQ00604 133 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 DEFB112Q30KQ8 113 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 ARSJQ5FYB0 599 aaPredicted RBP14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 IGHV7-81A0A0B4J1V7 117 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 FGF16O43320 207 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 LY6EQ16553 131 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 C5orf56Q8N8D9 126 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 RNASEH2CQ8TDP1 164 aaKnown RBP14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 WDR83OSQ9Y284 106 aa14.67□□□□□ -0.06
SEC61A2-201ENST00000298428 ZNF705EA8MWA4 302 aaPredicted RBP14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 MDKP21741 143 aaPredicted RBP14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 BTNL8Q6UX41 500 aa14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 TREML4Q6UXN2 200 aa14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 C19orf35Q6ZS72 473 aa14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 C9orf139Q6ZV77 190 aa14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 OR1P1Q8NH06 330 aa14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 CXorf58Q96LI9 332 aa14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 PSMG3Q9BT73 122 aaPredicted RBP14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 F11RQ9Y624 299 aaKnown RBP14.66□□□□□ -0.06
SEC61A2-201ENST00000298428 A6NDX4 124 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 FNDC10F2Z333 226 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 AKR1C1Q04828 323 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 CD69Q07108 199 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 HSPB9Q9BQS6 159 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 NPCDR1Q9BY65 106 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 NPVFQ9HCQ7 196 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 PITPNC1Q9UKF7 332 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 FBXO7Q9Y3I1 522 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 OPRK1P41145 380 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 RAB5CP51148 216 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 MFAP2P55001 183 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 PVRIGQ6DKI7 326 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 TIMM9Q9Y5J7 89 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 TEX15Q9BXT5 2789 aa14.65□□□□□ -0.06
SEC61A2-201ENST00000298428 FLNAP21333 2647 aaKnown RBP14.64□□□□□ -0.07
SEC61A2-201ENST00000298428 LINC00862A6NCI5 91 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms