RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 C16orf82Q7Z2V1 217 aa19.49■□□□□ 0.71
GTF2A1-201ENST00000298173 HSD17B13Q7Z5P4 300 aaPredicted RBP19.49■□□□□ 0.71
GTF2A1-201ENST00000298173 OR5R1Q8NH85 324 aa19.49■□□□□ 0.71
GTF2A1-201ENST00000298173 PRSS46E5RG02 174 aa19.49■□□□□ 0.71
GTF2A1-201ENST00000298173 LY6G6DO95868 133 aa19.49■□□□□ 0.71
GTF2A1-201ENST00000298173 NPY1RP25929 384 aa19.49■□□□□ 0.71
GTF2A1-201ENST00000298173 EGR2P11161 476 aaPredicted RBP19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 FOSL1P15407 271 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 AREGP15514 252 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 OR1S2Q8NGQ3 325 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 SSMEM1Q8WWF3 244 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 ARPC1AQ92747 370 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 HSPB9Q9BQS6 159 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 ZNF471Q9BX82 626 aaPredicted RBP19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 SLA2Q9H6Q3 261 aa19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 PAIP2BQ9ULR5 123 aaKnown RBP19.48■□□□□ 0.71
GTF2A1-201ENST00000298173 SNCAP37840 140 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 RAB11AP62491 216 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 HBG1P69891 147 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 HBG2P69892 147 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 RPL7L1Q6DKI1 246 aaKnown RBP19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 PVRIGQ6DKI7 326 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 OR8G2PQ6IF36 304 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 ETV3LQ6ZN32 361 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 MRPL41Q8IXM3 137 aaKnown RBP19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 ZNF114Q8NC26 417 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 OR10P1Q8NGE3 313 aa19.47■□□□□ 0.71
GTF2A1-201ENST00000298173 M0QZK8 103 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 SCAF4O95104 1147 aaKnown RBP19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 OR8U8P0C7N1 319 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 SRP14P37108 136 aaKnown RBP19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 STOML3Q8TAV4 291 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 P2RX4Q99571 388 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 FAM103A1Q9BTL3 118 aaKnown RBP19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 FBXO7Q9Y3I1 522 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 JTBO76095 146 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 CFDP00746 253 aaPredicted RBP19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 CLINT1Q14677 625 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 ASPHD1Q5U4P2 390 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 UBAC2Q8NBM4 344 aa19.46■□□□□ 0.71
GTF2A1-201ENST00000298173 CD99P14209 185 aa19.45■□□□□ 0.7
GTF2A1-201ENST00000298173 SLC38A11Q08AI6 406 aa19.45■□□□□ 0.7
GTF2A1-201ENST00000298173 TEX261Q6UWH6 196 aa19.45■□□□□ 0.7
GTF2A1-201ENST00000298173 ST8SIA2Q92186 375 aa19.45■□□□□ 0.7
GTF2A1-201ENST00000298173 PINX1Q96BK5 328 aaKnown RBP19.45■□□□□ 0.7
GTF2A1-201ENST00000298173 ARV1Q9H2C2 271 aa19.45■□□□□ 0.7
GTF2A1-201ENST00000298173 SH2D7A6NKC9 451 aaPredicted RBP19.44■□□□□ 0.7
GTF2A1-201ENST00000298173 REG1AP05451 166 aa19.44■□□□□ 0.7
GTF2A1-201ENST00000298173 APELAP0DMC3 54 aa19.44■□□□□ 0.7
GTF2A1-201ENST00000298173 HNF1AP20823 631 aa19.44■□□□□ 0.7
GTF2A1-201ENST00000298173 ATP6V1FQ16864 119 aa19.44■□□□□ 0.7
GTF2A1-201ENST00000298173 ATP5SQ99766 215 aa19.44■□□□□ 0.7
GTF2A1-201ENST00000298173 LINC01548A6NM66 108 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 HOXA3O43365 443 aaPredicted RBP19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 IFNA4P05014 189 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 CRYGCP07315 174 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 CTRB1P17538 263 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 SUB1P53999 127 aaKnown RBP eCLIP19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 CTRB2Q6GPI1 263 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 SIGLECL1Q8N7X8 197 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 SGMS2Q8NHU3 365 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 VPREB3Q9UKI3 123 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 DFFBO76075 338 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 MFAP2P55001 183 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 UBA52P62987 128 aaKnown RBP19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 VWC2Q2TAL6 325 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 BAP18Q8IXM2 172 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 OR1P1Q8NH06 330 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 GGACTQ9BVM4 153 aa19.43■□□□□ 0.7
GTF2A1-201ENST00000298173 BTBD17A6NE02 478 aa19.42■□□□□ 0.7
GTF2A1-201ENST00000298173 BLCAPP62952 87 aa19.42■□□□□ 0.7
GTF2A1-201ENST00000298173 ZNF266Q14584 549 aa19.42■□□□□ 0.7
GTF2A1-201ENST00000298173 TTC9CQ8N5M4 171 aa19.42■□□□□ 0.7
GTF2A1-201ENST00000298173 F11RQ9Y624 299 aaKnown RBP19.42■□□□□ 0.7
GTF2A1-201ENST00000298173 BORCS7-ASMTA0A0B4J1R7 106 aa19.41■□□□□ 0.7
GTF2A1-201ENST00000298173 TPT1P13693 172 aaKnown RBP19.41■□□□□ 0.7
GTF2A1-201ENST00000298173 ZNF680Q8NEM1 530 aa19.41■□□□□ 0.7
GTF2A1-201ENST00000298173 LFNGQ8NES3 379 aa19.41■□□□□ 0.7
GTF2A1-201ENST00000298173 ABHD5Q8WTS1 349 aa19.41■□□□□ 0.7
GTF2A1-201ENST00000298173 DMRT1Q9Y5R6 373 aa19.41■□□□□ 0.7
GTF2A1-201ENST00000298173 NPIPB5A8MRT5 1133 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 RGS13O14921 159 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 ATP6V0E1O15342 81 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 IGHG2P01859 326 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 EIF5AP63241 154 aaKnown RBP19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 LILRB2Q8N423 598 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 RNASEH2CQ8TDP1 164 aaKnown RBP19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 MDKP21741 143 aaPredicted RBP19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 CRIP2P52943 208 aaPredicted RBP19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 DLK1P80370 383 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 C19orf35Q6ZS72 473 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 TMEM86BQ8N661 226 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 GINS3Q9BRX5 216 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 TMEM147Q9BVK8 224 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 WNT10AQ9GZT5 417 aa19.4■□□□□ 0.7
GTF2A1-201ENST00000298173 AKIRIN2Q53H80 203 aa19.39■□□□□ 0.69
GTF2A1-201ENST00000298173 PARD6GQ9BYG4 376 aaPredicted RBP19.39■□□□□ 0.69
GTF2A1-201ENST00000298173 PARP11Q9NR21 331 aa19.39■□□□□ 0.69
GTF2A1-201ENST00000298173 HIVEP1P15822 2718 aa19.38■□□□□ 0.69
GTF2A1-201ENST00000298173 FBXO24O75426 580 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms