RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 FAM110CQ1W6H9 321 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 CENPVL3A0A0U1RRI6 287 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 A0A1W2PPI3 338 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 ORM2P19652 201 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 ZNF501Q96CX3 271 aaPredicted RBP9.85□□□□□ -0.83
SNIP1-201ENST00000296215 COQ2Q96H96 371 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 ETV2O00321 342 aaPredicted RBP9.84□□□□□ -0.83
SNIP1-201ENST00000296215 EDDM3AQ14507 147 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 ABHD17BQ5VST6 288 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 AMN1Q8IY45 258 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 IGFBP3P17936 291 aaPredicted RBP9.84□□□□□ -0.83
SNIP1-201ENST00000296215 PSG4Q00888 419 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 CENPVQ7Z7K6 275 aaPredicted RBP9.84□□□□□ -0.83
SNIP1-201ENST00000296215 OR13A1Q8NGR1 328 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
SNIP1-201ENST00000296215 LYRM4Q9HD34 91 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 SLX4Q8IY92 1834 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 FOXC1Q12948 553 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 PRNTQ86SH4 94 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 SPEM1Q8N4L4 309 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 LY96Q9Y6Y9 160 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 SNRNP200O75643 2136 aaKnown RBP9.84□□□□□ -0.83
SNIP1-201ENST00000296215 IGHV1-24A0A0C4DH33 117 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 SCTP09683 121 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 DEFA4P12838 97 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 UBALD2Q8IYN6 164 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 DECR2Q9NUI1 292 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 RNF115Q9Y4L5 304 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 KDM3BQ7LBC6 1761 aa9.84□□□□□ -0.83
SNIP1-201ENST00000296215 IGLV3-16A0A075B6K0 115 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 PRR32B1ATL7 298 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 H3BMM0 161 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
SNIP1-201ENST00000296215 GATA3P23771 443 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 C2orf83Q53S99 150 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 FAM214BQ7L5A3 538 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 MOB3BQ86TA1 216 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 ZNF645Q8N7E2 425 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 UBE2WQ96B02 151 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 PGPA6NDG6 321 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 C8orf88P0DMB2 117 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
SNIP1-201ENST00000296215 RRN3P1Q2M238 152 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 RPRMLQ8N4K4 120 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 BRK1Q8WUW1 75 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 VKORC1Q9BQB6 163 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 LAMB2P55268 1798 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 ANKRD36CQ5JPF3 1778 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 LINC01549A6NIU2 74 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 PRKNO60260 465 aaPredicted RBP9.83□□□□□ -0.84
SNIP1-201ENST00000296215 KLKB1P03952 638 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 WNT2P09544 360 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 IL15RAQ13261 267 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 CEND1Q8N111 149 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 C21orf140B9A014 251 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 BGLAPP02818 100 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 ZC2HC1BQ5TFG8 222 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 C10orf113Q5VZT2 155 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 DUX3Q96PT4 197 aa9.83□□□□□ -0.84
SNIP1-201ENST00000296215 PLCH1Q4KWH8 1693 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 MIA3Q5JRA6 1907 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 IGHV4-34P06331 123 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 GCSAMQ8N6F7 178 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 NABP1Q96AH0 204 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
SNIP1-201ENST00000296215 SLC25A20O43772 301 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 CEACAM18A8MTB9 384 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 P04436 131 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 C16orf52Q8NHV5 167 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 RGPD8O14715 1765 aaPredicted RBP9.82□□□□□ -0.84
SNIP1-201ENST00000296215 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
SNIP1-201ENST00000296215 A0A1W2PRU2 124 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 S100A4P26447 101 aaKnown RBP9.81□□□□□ -0.84
SNIP1-201ENST00000296215 NTF4P34130 210 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 SPACA3Q8IXA5 215 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 LRRC75A-AS1Q8N1F1 130 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 DEPPQ9NTK1 212 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 ZNF815PA8K554 130 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 FOXF1Q12946 379 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 IGF2-ASQ6U949 168 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 ZAR1Q86SH2 424 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 A0A0J9YY10 115 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 A0A1B0GX78 115 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 FOXI3A8MTJ6 420 aaPredicted RBP9.81□□□□□ -0.84
SNIP1-201ENST00000296215 LINC00694P0DN24 101 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 HERVK_113P63121 156 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 NTN5Q8WTR8 489 aaPredicted RBP9.81□□□□□ -0.84
SNIP1-201ENST00000296215 TOPAZ1Q8N9V7 1692 aa9.81□□□□□ -0.84
SNIP1-201ENST00000296215 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms