RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CD59P13987 128 aa10.71□□□□□ -0.7
PTCD1-201ENST00000292478 SAA1P0DJI8 122 aaPredicted RBP10.7□□□□□ -0.7
PTCD1-201ENST00000292478 CHODLQ9H9P2 273 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 IGHV1-18A0A0C4DH31 117 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 PINLYPA6NC86 204 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
PTCD1-201ENST00000292478 LHFPL1Q86WI0 220 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 RPP21Q9H633 154 aaKnown RBP10.7□□□□□ -0.7
PTCD1-201ENST00000292478 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 H3BTX0 84 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 TIMP3P35625 211 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 KIAA1644Q3SXP7 199 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 FOXA2Q9Y261 457 aaPredicted RBP10.7□□□□□ -0.7
PTCD1-201ENST00000292478 SCO2A0A1W2PP80 73 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 FOXI3A8MTJ6 420 aaPredicted RBP10.7□□□□□ -0.7
PTCD1-201ENST00000292478 TMEM133Q9H2Q1 129 aa10.7□□□□□ -0.7
PTCD1-201ENST00000292478 GAGE10A6NGK3 116 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 NBR2O15453 112 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 CBLN1P23435 193 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 JOSD1Q15040 202 aaPredicted RBP10.69□□□□□ -0.7
PTCD1-201ENST00000292478 IZUMO1RA6ND01 250 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 E9PLN8 166 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
PTCD1-201ENST00000292478 EGR1P18146 543 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 VKORC1Q9BQB6 163 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 PLSCR4Q9NRQ2 329 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 DICER1Q9UPY3 1922 aaKnown RBP10.69□□□□□ -0.7
PTCD1-201ENST00000292478 A0A1B0GUT8 65 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 H7C1H1 209 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 IGHV3-48P01763 117 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
PTCD1-201ENST00000292478 DOCK6Q96HP0 2047 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
PTCD1-201ENST00000292478 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 MIR17HGQ75NE6 70 aa10.69□□□□□ -0.7
PTCD1-201ENST00000292478 TRBV20OR9-2A0A075B6H5 130 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 GRIFINA4D1Z8 144 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 CCL20P78556 96 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 PRCDQ00LT1 54 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 DNLZQ5SXM8 178 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 FAM168AQ92567 244 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 H0YIZ8 118 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
PTCD1-201ENST00000292478 ATP5G3P48201 142 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 CIRBPQ14011 172 aaKnown RBP10.68□□□□□ -0.7
PTCD1-201ENST00000292478 WNT10AQ9GZT5 417 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 A0A087WV48 116 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 ASIPP42127 132 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 DPH3Q96FX2 82 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 SGK494Q96LW2 274 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 H3BVH4 76 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 FAM166AQ6J272 317 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 MBD3L1Q8WWY6 194 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 PAX1P15863 534 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 SMIM12Q96EX1 92 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
PTCD1-201ENST00000292478 A0A1W2PRE2 83 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 DPRXA6NFQ7 191 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 RPL23P62829 140 aaKnown RBP10.67□□□□□ -0.7
PTCD1-201ENST00000292478 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 Q9H3A6 140 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 TCF21O43680 179 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 FGFBP3Q8TAT2 258 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 RAXQ9Y2V3 346 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 PLXNA3P51805 1871 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 IGKV1-12A0A0C4DH73 117 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 ATP5LO75964 103 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 IGKV1D-12P01611 117 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 ZNF56Q15929 161 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 SLC50A1Q9BRV3 221 aa10.67□□□□□ -0.7
PTCD1-201ENST00000292478 TRBV6-6A0A0A6YYG2 114 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 TCTAP57738 103 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 TCRBV4S1A1TA0A5B7 111 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 SRRM5B3KS81 715 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
PTCD1-201ENST00000292478 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 CD69Q07108 199 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 ZNF257Q9Y2Q1 563 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 CCL3L1P16619 93 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 HOXA5P20719 270 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 ZNF414Q96IQ9 312 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 PNRC2Q9NPJ4 139 aaKnown RBP10.66□□□□□ -0.7
PTCD1-201ENST00000292478 OSTCQ9NRP0 149 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 KCNS1Q96KK3 526 aa10.66□□□□□ -0.7
PTCD1-201ENST00000292478 SCN2AQ99250 2005 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 IGKV1D-8A0A087WSZ0 117 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 A0A1B0GW64 132 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 C1QTNF9BB2RNN3 333 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 SLC17A3O00476 420 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 TMEM42Q69YG0 159 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 FOXL2NBQ6ZUU3 175 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 ZNF256Q9Y2P7 627 aaPredicted RBP10.65□□□□□ -0.7
PTCD1-201ENST00000292478 IGHV1-46P01743 117 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 ADIPOQQ15848 244 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 NUP37Q8NFH4 326 aa10.65□□□□□ -0.7
PTCD1-201ENST00000292478 IMMP2LQ96T52 175 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms