RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 FA2HQ7L5A8 372 aa3.99□□□□□ -1.77
UBR1-201ENST00000290650 SSX8Q7RTT4 187 aa3.99□□□□□ -1.77
UBR1-201ENST00000290650 ERASQ7Z444 233 aa3.99□□□□□ -1.77
UBR1-201ENST00000290650 ZNF525Q8N782 197 aa3.99□□□□□ -1.77
UBR1-201ENST00000290650 ADTRPQ96IZ2 230 aa3.99□□□□□ -1.77
UBR1-201ENST00000290650 NABP2Q9BQ15 211 aa3.99□□□□□ -1.77
UBR1-201ENST00000290650 IGKV3D-15A0A087WSY6 115 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 LINC00473A8K010 186 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 F5H697 171 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 M0R143 59 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 MLNRO43193 412 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IGKV3-15P01624 115 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 C1QTNF9P0C862 333 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 ZNF25P17030 456 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 LGALS7P47929 136 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 PTTG1IPP53801 180 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 PNRC1Q12796 327 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 TIMM23BQ5SRD1 257 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 LINC00305Q7Z4B0 112 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 LHFPL1Q86WI0 220 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 CLDND2Q8NHS1 167 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 GALNT14Q96FL9 552 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SMIM8Q96KF7 97 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 NDFIP1Q9BT67 221 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 RBFOX2O43251 390 aaKnown RBP eCLIP3.98□□□□□ -1.77
UBR1-201ENST00000290650 CIDEAO60543 219 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 APCSP02743 223 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IL6RP08887 468 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 GLRXP35754 106 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 HSPE1P61604 102 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 IQCJQ1A5X6 159 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 MORN2Q502X0 79 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IBA57Q5T440 356 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 ZBTB34Q8NCN2 500 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 TBX15Q96SF7 602 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 TMEM167BQ9NRX6 74 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 TMEM106BQ9NUM4 274 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 ZDHHC8Q9ULC8 765 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 GOLT1BQ9Y3E0 138 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IGKV1-6A0A0C4DH72 117 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 A0A1B0GV90 55 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SH2D7A6NKC9 451 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 OR5AL1P0C617 328 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 AGAP20933 346 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 HNRNPA3P51991 378 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 FOXA3P55318 350 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 KLRD1Q13241 179 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 CENPWQ5EE01 88 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 CYB5R2Q6BCY4 276 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 DTX1Q86Y01 620 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 C1QL4Q86Z23 238 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 ANAPC16Q96DE5 110 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 K7ERU9 68 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 RPLP1P05386 114 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 PYYP10082 97 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 BMI1P35226 326 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 NHLH1Q02575 133 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 Q5PR19 223 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 Q6ZN92 141 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 C5orf17Q8NAS9 161 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 OR4D5Q8NGN0 318 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 WFDC12Q8WWY7 111 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 PERPQ96FX8 193 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 MRPL18Q9H0U6 180 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 RNF115Q9Y4L5 304 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 AMMECR1Q9Y4X0 333 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A10PA6NDY2 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A18PA6NE21 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A16PA6NEW6 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A20PA6NIJ5 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A8PA6NJQ4 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A7PA6NKC0 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A22PA8MWA6 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A12PA8MX19 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A5PA8MXJ8 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A23PA8MXZ1 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 K7EM74 188 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IGKV1D-33P01593 117 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IGKV1-33P01594 117 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 IGKV1-5P01602 117 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A15PP0C7V4 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A13PP0C7W8 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A14PP0C7W9 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A24PP0C7X0 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 S100A7AQ86SG5 101 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 VSTM2AQ8TAG5 236 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 LSM10Q969L4 123 aaKnown RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 SEMA5BQ9P283 1151 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 NCOR2Q9Y618 2525 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SS18L1O75177 396 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 CXCL1P09341 107 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 SAA1P0DJI8 122 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 WT1P19544 449 aaPredicted RBP3.98□□□□□ -1.77
UBR1-201ENST00000290650 TMPRSS3P57727 454 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM90A1Q86YD7 464 aa3.98□□□□□ -1.77
UBR1-201ENST00000290650 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms